Non-Coding RNA Search

rpgl25_p18.y1

Sequence:


               
               CCATGATGGGAACTCCCATTGCTCTTCTTATTTAGGGAGTTCTTTGGGTGTATTTTCTCA
AAGGTACGGTTATCAGGTAGAACTGTCTGAACAGATCTGTAACCTTCTTGCCGTCTCGAG
TTCCTCTCCAGGTAGATGGGACCAGTCTGCTGACCTGTTGACAACCCTGCAGTTATTTCT
TCTTCATTAATTTTGCTTATCTTAGCTATTTAACAGGGCTGCCACGGTCCTCTAGTTTTT
TTAAATTTGCACTTCGTTCATGGCTAAAGAGATGGTGTGTTTTTTCACTCAGTGACATTC
GTTGTCTCTTTACCACCTATAAATTTACCAAGTCGAGGAGTGCCCGCTGTGGCACAGTGG
ATTAAGGATCCAGTGGTGGCGCAGGTTCAATCCCCGGCAAGTGCAGTGGTTGAGGACCCA
GCGTTGCCACAGCGATGGCATAGTTCGAAGCTGCAACTCAGATTTGATCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCATGATGGGAACTCCCATTGCTCTTCTTATTTAGGGAGTTCTTTGGGTGTATTTTCTCA
AAGGTACGGTTATCAGGTAGAACTGTCTGAACAGATCTGTAACCTTCTTGCCGTCTCGAG
TTCCTCTCCAGGTAGATGGGACCAGTCTGCTGACCTGTTGACAACCCTGCAGTTATTTCT
TCTTCATTAATTTTGCTTATCTTAGCTATTTAACAGGGCTGCCACGGTCCTCTAGTTTTT
TTAAATTTGCACTTCGTTCATGGCTAAAGAGATGGTGTGTTTTTTCACTCAGTGACATTC
GTTGTCTCTTTACCACCTATAAATTTACCAAGTCGAGGAGTGCCCGCTGTGGCACAGTGG
ATTAAGGATCCAGTGGTGGCGCAGGTTCAATCCCCGGCAAGTGCAGTGGTTGAGGACCCA
GCGTTGCCACAGCGATGGCATAGTTCGAAGCTGCAACTCAGATTTGATCCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               138-257, - strand, RNAz p=0.999141

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               138-257, - strand, RNAz p=0.999141

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               19-304, gnl|bosTau2|chr19 (49493969-49494252)
               

               
               19-304, gnl|Hg17|chr17 (71603497-71603221)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-304, gnl|bosTau2|chr19 (49493969-49494252)
               

               
               19-304, gnl|Hg17|chr17 (71603497-71603221)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	19-304, gnl\|bosTau2\|chr19 (49493969-49494252)
	19-304, gnl\|Hg17\|chr17 (71603497-71603221)