Non-Coding RNA Search

rpgl27_m24.y1

Sequence:


               
               CAAAGACTCTCTCTTGAGGACTGAAATGGCGAGAAAGAAATATTTAATAAATAGCTACCA
GCACTGGATTAAGAAGTTGGCTCTAATCTGTTCTCTTCCATTAACTCACTCTGTTTCCTG
CGGTAAGCCACTTGACTTCTCGGTATTTTGTTCTTTTTTCTGCATGAACTAGTTATATGT
TTCCTTGCATAAGTCACTTCACATTGGTTTGTCTATATAATAAACTTCATTATTTCTGGG
AATTGTCTGTCCTTCTTTTCCATGAATTGCCCCAGCACCATTCCAAACAATGAGCCTGTC
CCCTCCCACCTCTGCCAAAATTCATTGCTCCAATCATTTTTTTTTACATTATTCATTTAC
TTTCtttttaattgtggtaaaatttatatagcaaatttaccattttaagcatttttaaga
gtatgagtcagtggcattaattacactcacaatgcaaccatcaccactatctattcccaa
aagttttttgtcacctcagacaaaaactctgtaACCTTAACCAACGATGCCCATGCTTCC
CTGTGCTTGGTCTCTGGTCATCTCTACTCCACTTTCTAGCTCTGGGAACATCCGTCTTCT
AGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAGACTCTCTCTTGAGGACTGAAATGGCGAGAAAGAAATATTTAATAAATAGCTACCA
GCACTGGATTAAGAAGTTGGCTCTAATCTGTTCTCTTCCATTAACTCACTCTGTTTCCTG
CGGTAAGCCACTTGACTTCTCGGTATTTTGTTCTTTTTTCTGCATGAACTAGTTATATGT
TTCCTTGCATAAGTCACTTCACATTGGTTTGTCTATATAATAAACTTCATTATTTCTGGG
AATTGTCTGTCCTTCTTTTCCATGAATTGCCCCAGCACCATTCCAAACAATGAGCCTGTC
CCCTCCCACCTCTGCCAAAATTCATTGCTCCAATCATTTTTTTTTACATTATTCATTTAC
TTTCtttttaattgtggtaaaatttatatagcaaatttaccattttaagcatttttaaga
gtatgagtcagtggcattaattacactcacaatgcaaccatcaccactatctattcccaa
aagttttttgtcacctcagacaaaaactctgtaACCTTAACCAACGATGCCCATGCTTCC
CTGTGCTTGGTCTCTGGTCATCTCTACTCCACTTTCTAGCTCTGGGAACATCCGTCTTCT
AGATA

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-344, gnl|bosTau2|chr29 (24038220-24038563)
               

               
               1-344, gnl|Hg17|chr11 (127536538-127536210)
               

               
               1-344, gnl|Mm7|chr9 (32991928-32992260)
               


               
               365-605, gnl|bosTau2|chrX (5507828-5507582)
               

               
               365-605, gnl|Hg17|chr12 (91172021-91171731)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-344, gnl|bosTau2|chr29 (24038220-24038563)
               

               
               1-344, gnl|Hg17|chr11 (127536538-127536210)
               

               
               1-344, gnl|Mm7|chr9 (32991928-32992260)
               


               
               365-605, gnl|bosTau2|chrX (5507828-5507582)
               

               
               365-605, gnl|Hg17|chr12 (91172021-91171731)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-344, gnl\|bosTau2\|chr29 (24038220-24038563)
	1-344, gnl\|Hg17\|chr11 (127536538-127536210)
	1-344, gnl\|Mm7\|chr9 (32991928-32992260)

	365-605, gnl\|bosTau2\|chrX (5507828-5507582)
	365-605, gnl\|Hg17\|chr12 (91172021-91171731)