Non-Coding RNA Search

rpgl29_a21.y1

Sequence:


               
               GGCTGTCAGAAATGATAAATGGTAAATCTTTATGATTTTATTACTGTATGGCAAGCAAGC
CTAATAAAGCCAAACTGGTTCCCCAACATTCTTTGTAACATAAAATTACAACATCACCCT
TTAGTGCTTCTATAATTAAGGTTGTGTCAGCATTTATATTTTAAAATATCTTTTCAGGGG
TTACAGATGAACATTAAAATATTTGAGATCggagttcccattgtggcacataggaaacga
atctgactaggaaccatgaggttgcgggttcagtccctggcctcactcagtgggttaggg
atccagtgttgccatgaactgtggcgtaggtcgcagacatggctcggatcccgcattgct
ctgtctgtggcataggccggcagcaacagctctgattagacccctggcctgggaatctcc
atatgccgtgggtgcagtcctaaaagaacaaaaaagacagaaaTATGTATGTATATTTTT
TAGATGAAGCAGTATATTTTTTAGATGAAGCAGTTCCCACTGtggtgcagtgggttaaga
atctggtgttgccccagctgtggtgtaggtcacagctgtgactcagatttgatccctggc
ctgggaatttacatatgccgTGAGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGTCAGAAATGATAAATGGTAAATCTTTATGATTTTATTACTGTATGGCAAGCAAGC
CTAATAAAGCCAAACTGGTTCCCCAACATTCTTTGTAACATAAAATTACAACATCACCCT
TTAGTGCTTCTATAATTAAGGTTGTGTCAGCATTTATATTTTAAAATATCTTTTCAGGGG
TTACAGATGAACATTAAAATATTTGAGATCggagttcccattgtggcacataggaaacga
atctgactaggaaccatgaggttgcgggttcagtccctggcctcactcagtgggttaggg
atccagtgttgccatgaactgtggcgtaggtcgcagacatggctcggatcccgcattgct
ctgtctgtggcataggccggcagcaacagctctgattagacccctggcctgggaatctcc
atatgccgtgggtgcagtcctaaaagaacaaaaaagacagaaaTATGTATGTATATTTTT
TAGATGAAGCAGTATATTTTTTAGATGAAGCAGTTCCCACTGtggtgcagtgggttaaga
atctggtgttgccccagctgtggtgtaggtcacagctgtgactcagatttgatccctggc
ctgggaatttacatatgccgTGAGTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-209, gnl|bosTau2|chr9 (58165161-58164953)
               

               
               1-209, gnl|Hg17|chr4 (20164456-20164662)
               

               
               1-209, gnl|Mm7|chr5 (47512734-47512940)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-209, gnl|bosTau2|chr9 (58165161-58164953)
               

               
               1-209, gnl|Hg17|chr4 (20164456-20164662)
               

               
               1-209, gnl|Mm7|chr5 (47512734-47512940)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-209, gnl\|bosTau2\|chr9 (58165161-58164953)
	1-209, gnl\|Hg17\|chr4 (20164456-20164662)
	1-209, gnl\|Mm7\|chr5 (47512734-47512940)