rpgl32_l8.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCTCTTCGGAATCGGCAGAGGAAAGTGAGAAGAATTAAGCTAGGATACACCCAAACAA ATGTTGGGGAAGCCCTGGCAGCTGTGCACGGCTCTGAATTCAGTCAAACGACTATTTGCC GATTTGAAAACCTACAGCTCAGCTTCAAAAATGCATGCAAACTAAAAGCAATATTATCCA AATGGCTGGAGGAAGCTGAGCAAGTAGGAGCTTTATACAATGAGAAAGTGGGAGCAAATG AAAGAAAAAGAAAACGGAGAACAACAATCAGTATTGCTGCAAAGGATGCCCTGGAGAGAC ACTTTGGAGAACAGAATAAACCTTCCTCTCAAGAGATCTTGAGGATGGCTGAAGAACTGA ACCTGGAGAAAGAAGTAGTGAGGGTTTGGTTTTGCAACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCTCTTCGGAATCGGCAGAGGAAAGTGAGAAGAATTAAGCTAGGATACACCCAAACAA ATGTTGGGGAAGCCCTGGCAGCTGTGCACGGCTCTGAATTCAGTCAAACGACTATTTGCC GATTTGAAAACCTACAGCTCAGCTTCAAAAATGCATGCAAACTAAAAGCAATATTATCCA AATGGCTGGAGGAAGCTGAGCAAGTAGGAGCTTTATACAATGAGAAAGTGGGAGCAAATG AAAGAAAAAGAAAACGGAGAACAACAATCAGTATTGCTGCAAAGGATGCCCTGGAGAGAC ACTTTGGAGAACAGAATAAACCTTCCTCTCAAGAGATCTTGAGGATGGCTGAAGAACTGA ACCTGGAGAAAGAAGTAGTGAGGGTTTGGTTTTGCAACC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 83-210, + strand, RNAz p=0.988462 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 83-210, + strand, RNAz p=0.988462 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 44-210, gnl|bosTau2|chr1 (19420092-19419926) | |
| 44-210, gnl|canFam2|chr31 (3782934-3782743) | |
| 44-210, gnl|danRer3|chr1 (11115653-11115842) | |
| 44-210, gnl|dasNov1|scaffold_42498 (40366-40174) | |
| 44-210, gnl|echTel1|scaffold_282288 (5483-5293) | |
| 44-210, gnl|fr1|chrUn (111924507-111924692) | |
| 44-210, gnl|galGal2|chr1 (86757189-86756993) | |
| 44-210, gnl|hg17|chr3 (87393909-87394099) | |
| 44-210, gnl|Hg17|chr3 (87394077-87393911) | |
| 44-210, gnl|loxAfr1|scaffold_93979 (4904-4714) | |
| 44-210, gnl|mm7|chr16 (65452269-65452079) | |
| 44-210, gnl|Mm7|chr16 (65452099-65452265) | |
| 44-210, gnl|monDom2|scaffold_25 (10412674-10412863) | |
| 44-210, gnl|oryCun1|scaffold_208760 (45266-45077) | |
| 44-210, gnl|panTro1|chr2 (89738235-89738425) | |
| 44-210, gnl|rheMac2|chr2 (11504723-11504913) | |
| 44-210, gnl|rn3|chr11 (2977417-2977230) | |
| 44-210, gnl|tetNig1|chr2 (13779230-13779399) | |
| 44-210, gnl|xenTro1|scaffold_909 (447666-447471) | |
| 269-399, gnl|bosTau2|chr1 (19418079-19417949) | |
| 269-399, gnl|canFam2|chr31 (3784745-3784550) | |
| 269-399, gnl|danRer3|chr1 (11113986-11114165) | |
| 269-399, gnl|dasNov1|scaffold_42498 (42165-41978) | |
| 269-399, gnl|echTel1|scaffold_282288 (8591-8407) | |
| 269-399, gnl|fr1|chrUn (111924008-111924195) | |
| 269-399, gnl|galGal2|chr1 (86762847-86762665) | |
| 269-399, gnl|hg17|chr3 (87391769-87391960) | |
| 269-399, gnl|Hg17|chr3 (87391947-87391817) | |
| 269-399, gnl|loxAfr1|scaffold_12023 (9642-9826) | |
| 269-399, gnl|mm7|chr16 (65454219-65454017) | |
| 269-399, gnl|Mm7|chr16 (65454039-65454169) | |
| 269-399, gnl|monDom2|scaffold_25 (10409838-10410022) | |
| 269-399, gnl|oryCun1|scaffold_208760 (47309-47118) | |
| 269-399, gnl|panTro1|chr2 (89736109-89736300) | |
| 269-399, gnl|rheMac2|chr2 (11502560-11502751) | |
| 269-399, gnl|rn3|chr11 (2979146-2978945) | |
| 269-399, gnl|tetNig1|chr2 (13778761-13778930) | |
| 269-399, gnl|xenTro1|scaffold_909 (449541-449360) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 44-210, gnl|bosTau2|chr1 (19420092-19419926) | |
| 44-210, gnl|canFam2|chr31 (3782934-3782743) | |
| 44-210, gnl|danRer3|chr1 (11115653-11115842) | |
| 44-210, gnl|dasNov1|scaffold_42498 (40366-40174) | |
| 44-210, gnl|echTel1|scaffold_282288 (5483-5293) | |
| 44-210, gnl|fr1|chrUn (111924507-111924692) | |
| 44-210, gnl|galGal2|chr1 (86757189-86756993) | |
| 44-210, gnl|hg17|chr3 (87393909-87394099) | |
| 44-210, gnl|Hg17|chr3 (87394077-87393911) | |
| 44-210, gnl|loxAfr1|scaffold_93979 (4904-4714) | |
| 44-210, gnl|mm7|chr16 (65452269-65452079) | |
| 44-210, gnl|Mm7|chr16 (65452099-65452265) | |
| 44-210, gnl|monDom2|scaffold_25 (10412674-10412863) | |
| 44-210, gnl|oryCun1|scaffold_208760 (45266-45077) | |
| 44-210, gnl|panTro1|chr2 (89738235-89738425) | |
| 44-210, gnl|rheMac2|chr2 (11504723-11504913) | |
| 44-210, gnl|rn3|chr11 (2977417-2977230) | |
| 44-210, gnl|tetNig1|chr2 (13779230-13779399) | |
| 44-210, gnl|xenTro1|scaffold_909 (447666-447471) | |
| 269-399, gnl|bosTau2|chr1 (19418079-19417949) | |
| 269-399, gnl|canFam2|chr31 (3784745-3784550) | |
| 269-399, gnl|danRer3|chr1 (11113986-11114165) | |
| 269-399, gnl|dasNov1|scaffold_42498 (42165-41978) | |
| 269-399, gnl|echTel1|scaffold_282288 (8591-8407) | |
| 269-399, gnl|fr1|chrUn (111924008-111924195) | |
| 269-399, gnl|galGal2|chr1 (86762847-86762665) | |
| 269-399, gnl|hg17|chr3 (87391769-87391960) | |
| 269-399, gnl|Hg17|chr3 (87391947-87391817) | |
| 269-399, gnl|loxAfr1|scaffold_12023 (9642-9826) | |
| 269-399, gnl|mm7|chr16 (65454219-65454017) | |
| 269-399, gnl|Mm7|chr16 (65454039-65454169) | |
| 269-399, gnl|monDom2|scaffold_25 (10409838-10410022) | |
| 269-399, gnl|oryCun1|scaffold_208760 (47309-47118) | |
| 269-399, gnl|panTro1|chr2 (89736109-89736300) | |
| 269-399, gnl|rheMac2|chr2 (11502560-11502751) | |
| 269-399, gnl|rn3|chr11 (2979146-2978945) | |
| 269-399, gnl|tetNig1|chr2 (13778761-13778930) | |
| 269-399, gnl|xenTro1|scaffold_909 (449541-449360) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |