Non-Coding RNA Search

rpigca0_000564.y1

Sequence:


               
               GAGAGAGAGAACGACGAGACCAAGAGCCAGGCCCTAGAGGAGCTGACGAGTTCTACGAGG
CCAAACTGCAGGAGAAAATCAGCCTTCTTGAAGAGGCACAGGAAGATGTCAGGCAGCAGC
TGCGCGAGTTCGAAGAGACCAAGAAGCAGATCGAAGAAGATGAAGACCGGGAGATCCAAG
ATATCAAAACCAAATATGAAAAGAAGCTGCGGGATGAAAAGGAATCGAACCTGCGGCTTA
AAGGAGAAACGGGCATCATGAGGAAGAAGTTCAGCAGCCTGCAGAAGGAGATCGAAGAGC
GAACCAACGACATTGAGCTCCTGAAGGGAGAGCAGGTGAAGCTGCAGGGGGTCATCAAGT
CCCTGGAGAAGGACATCCTGGGCCTTAAGCGGGAGATCCAGGAAAGAGACGAGACGATCC
AAGACAAGGAGAAGCGAATCTATGATCTTAAAAAGAAAAATCAAGAACTAGAGAAATTCA
AGTTTGTGCTCGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAGAGAGAACGACGAGACCAAGAGCCAGGCCCTAGAGGAGCTGACGAGTTCTACGAGG
CCAAACTGCAGGAGAAAATCAGCCTTCTTGAAGAGGCACAGGAAGATGTCAGGCAGCAGC
TGCGCGAGTTCGAAGAGACCAAGAAGCAGATCGAAGAAGATGAAGACCGGGAGATCCAAG
ATATCAAAACCAAATATGAAAAGAAGCTGCGGGATGAAAAGGAATCGAACCTGCGGCTTA
AAGGAGAAACGGGCATCATGAGGAAGAAGTTCAGCAGCCTGCAGAAGGAGATCGAAGAGC
GAACCAACGACATTGAGCTCCTGAAGGGAGAGCAGGTGAAGCTGCAGGGGGTCATCAAGT
CCCTGGAGAAGGACATCCTGGGCCTTAAGCGGGAGATCCAGGAAAGAGACGAGACGATCC
AAGACAAGGAGAAGCGAATCTATGATCTTAAAAAGAAAAATCAAGAACTAGAGAAATTCA
AGTTTGTGCTCGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               94-269, gnl|bosTau2|chr3 (72030451-72030276)
               

               
               94-269, gnl|Hg17|chr1 (43357586-43357761)
               

               
               94-269, gnl|Mm7|chr4 (117957604-117957429)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               94-269, gnl|bosTau2|chr3 (72030451-72030276)
               

               
               94-269, gnl|Hg17|chr1 (43357586-43357761)
               

               
               94-269, gnl|Mm7|chr4 (117957604-117957429)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	94-269, gnl\|bosTau2\|chr3 (72030451-72030276)
	94-269, gnl\|Hg17\|chr1 (43357586-43357761)
	94-269, gnl\|Mm7\|chr4 (117957604-117957429)