rpigca0_001730.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATGAGTATGCACAATGTAAAGCTGTTTCTATACCAGATTCTACGTGGTTTGGCATATTG CCACAGGAGAAAGGTCTTGCATCGAGACTTAAAACCGCAGAACCTCCTCATTAATGAAAA AGGAGAATTAAAGCTAGCAGATTTTGGACTAGCCAGAGCCAAGTCAGTTCCCACAAAGAC CTACTCAAATGAAGTTGTCACGCTGTGGTACCGGCCACCTGATGTGCTTCTCGGTTCCTC AGAGTACTCAACACAGATTGACATGTGGGGTGTTGGTTGCATTTTCTTTGAAATGGCTTC TGGAAGACCTCTGTTTCCAGGATCAACTGTGGAAGATGAACTGCACTTAATTTTCCGACT GTTAGGAACTCCATCTCAGGAAACTTGGCCAGGTGTTTCTTCAAATGATGAGTTCAAGAA CTACAACTTTCCAAAATATAAACCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATGAGTATGCACAATGTAAAGCTGTTTCTATACCAGATTCTACGTGGTTTGGCATATTG CCACAGGAGAAAGGTCTTGCATCGAGACTTAAAACCGCAGAACCTCCTCATTAATGAAAA AGGAGAATTAAAGCTAGCAGATTTTGGACTAGCCAGAGCCAAGTCAGTTCCCACAAAGAC CTACTCAAATGAAGTTGTCACGCTGTGGTACCGGCCACCTGATGTGCTTCTCGGTTCCTC AGAGTACTCAACACAGATTGACATGTGGGGTGTTGGTTGCATTTTCTTTGAAATGGCTTC TGGAAGACCTCTGTTTCCAGGATCAACTGTGGAAGATGAACTGCACTTAATTTTCCGACT GTTAGGAACTCCATCTCAGGAAACTTGGCCAGGTGTTTCTTCAAATGATGAGTTCAAGAA CTACAACTTTCCAAAATATAAACCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 34-402, gnl|bosTau2|chr5 (32366812-32367179) | |
| 34-402, gnl|Hg17|chr12 (54648840-54651201) | |
| 34-402, gnl|Mm7|chr10 (128204340-128201337) | |
| 146-268, gnl|bosTau2|chr16 (1387151-1387273) | |
| 146-268, gnl|canFam2|chr38 (4998271-4998365) | |
| 146-268, gnl|danRer3|chr11 (41215796-41215702) | |
| 146-268, gnl|dasNov1|scaffold_46068 (11195-11288) | |
| 146-268, gnl|echTel1|scaffold_297484 (3934-4026) | |
| 146-268, gnl|fr1|chrUn (172962913-172963007) | |
| 146-268, gnl|galGal2|chr26 (767656-767750) | |
| 146-268, gnl|hg17|chr1 (202228827-202228921) | |
| 146-268, gnl|Hg17|chr1 (202228832-202228954) | |
| 146-268, gnl|loxAfr1|scaffold_79516 (4476-4570) | |
| 146-268, gnl|mm7|chr1 (132013176-132013082) | |
| 146-268, gnl|Mm7|chr1 (132013169-132013047) | |
| 146-268, gnl|monDom2|scaffold_13 (7240751-7240836) | |
| 146-268, gnl|oryCun1|scaffold_211752 (21817-21902) | |
| 146-268, gnl|panTro1|chr1 (185186818-185186912) | |
| 146-268, gnl|rheMac2|chr1 (164886875-164886781) | |
| 146-268, gnl|rn3|chr13 (45013745-45013651) | |
| 146-268, gnl|tetNig1|chr11 (10596674-10596768) | |
| 146-268, gnl|xenTro1|scaffold_19 (3633661-3633746) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 34-402, gnl|bosTau2|chr5 (32366812-32367179) | |
| 34-402, gnl|Hg17|chr12 (54648840-54651201) | |
| 34-402, gnl|Mm7|chr10 (128204340-128201337) | |
| 146-268, gnl|bosTau2|chr16 (1387151-1387273) | |
| 146-268, gnl|canFam2|chr38 (4998271-4998365) | |
| 146-268, gnl|danRer3|chr11 (41215796-41215702) | |
| 146-268, gnl|dasNov1|scaffold_46068 (11195-11288) | |
| 146-268, gnl|echTel1|scaffold_297484 (3934-4026) | |
| 146-268, gnl|fr1|chrUn (172962913-172963007) | |
| 146-268, gnl|galGal2|chr26 (767656-767750) | |
| 146-268, gnl|hg17|chr1 (202228827-202228921) | |
| 146-268, gnl|Hg17|chr1 (202228832-202228954) | |
| 146-268, gnl|loxAfr1|scaffold_79516 (4476-4570) | |
| 146-268, gnl|mm7|chr1 (132013176-132013082) | |
| 146-268, gnl|Mm7|chr1 (132013169-132013047) | |
| 146-268, gnl|monDom2|scaffold_13 (7240751-7240836) | |
| 146-268, gnl|oryCun1|scaffold_211752 (21817-21902) | |
| 146-268, gnl|panTro1|chr1 (185186818-185186912) | |
| 146-268, gnl|rheMac2|chr1 (164886875-164886781) | |
| 146-268, gnl|rn3|chr13 (45013745-45013651) | |
| 146-268, gnl|tetNig1|chr11 (10596674-10596768) | |
| 146-268, gnl|xenTro1|scaffold_19 (3633661-3633746) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) |