Non-Coding RNA Search

rpigca0_001854.y1

Sequence:


               
               GCATAAGTGCCCATTGTTTAGGCAGCTGTTCATCAACCATGTTTCTATGAAAATAAGTCT
TTCTCATGAGGCAGTTGTGTGGGAATAGCTAATTCTGGCCTGCTGCTGTGCAGGGTGAGG
TTAAAAACATGGTAACTTGTCACAACACAATTCTTCTTGTTCTTTCTGCTGTGGGCTGAC
TCTACATTACTCGCTTTGTTTGCTCTAGAATGGAATCTACTCACCATTTACTAAAATGAA
ATGCATGTCTTGGGGGAGGCAAAGTCCAGTTCACTAGGGCTTGCATCTTAAAGAGAAAGG
AGCCCTGCTCCCACTGTGACTAATTGTTAGGAATGTTATTTGGCTTGTTTAAATCCAGAT
TGCAGTTCTGGAGTTGGATTTAATACGCCGGGGCTATTTTGTTTCTTGGTTGAAATCATG
TTCATTGCTCTTAGCAGTACAGATTAATTTTTAAAGTCGTAGGAAGTAGGCAGAGGTGAG
CGTTAGAGAGTTTAGCATGATCGTGCACAACTCTGGGATCTTACAGATATGGGTCAACAT
CCTGATCTCCAGTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATAAGTGCCCATTGTTTAGGCAGCTGTTCATCAACCATGTTTCTATGAAAATAAGTCT
TTCTCATGAGGCAGTTGTGTGGGAATAGCTAATTCTGGCCTGCTGCTGTGCAGGGTGAGG
TTAAAAACATGGTAACTTGTCACAACACAATTCTTCTTGTTCTTTCTGCTGTGGGCTGAC
TCTACATTACTCGCTTTGTTTGCTCTAGAATGGAATCTACTCACCATTTACTAAAATGAA
ATGCATGTCTTGGGGGAGGCAAAGTCCAGTTCACTAGGGCTTGCATCTTAAAGAGAAAGG
AGCCCTGCTCCCACTGTGACTAATTGTTAGGAATGTTATTTGGCTTGTTTAAATCCAGAT
TGCAGTTCTGGAGTTGGATTTAATACGCCGGGGCTATTTTGTTTCTTGGTTGAAATCATG
TTCATTGCTCTTAGCAGTACAGATTAATTTTTAAAGTCGTAGGAAGTAGGCAGAGGTGAG
CGTTAGAGAGTTTAGCATGATCGTGCACAACTCTGGGATCTTACAGATATGGGTCAACAT
CCTGATCTCCAGTCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-555, gnl|bosTau2|chr19 (36520934-36521501)
               

               
               4-555, gnl|Hg17|chr17 (37408779-37408184)
               

               
               4-555, gnl|Mm7|chr11 (100714559-100713833)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-555, gnl|bosTau2|chr19 (36520934-36521501)
               

               
               4-555, gnl|Hg17|chr17 (37408779-37408184)
               

               
               4-555, gnl|Mm7|chr11 (100714559-100713833)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	4-555, gnl\|bosTau2\|chr19 (36520934-36521501)
	4-555, gnl\|Hg17\|chr17 (37408779-37408184)
	4-555, gnl\|Mm7\|chr11 (100714559-100713833)