Non-Coding RNA Search

rpigca0_002822.y1

Sequence:


               
               GATATAACTGAGCAGAAATATAGACCAGTTACTAGTTCTTGAGTGAGTGTTTCCGGAGAA
CTTCTGTCAGGTTTGAAACCACAAAAGGAAATGAGCTTGTGCCTCTGTCTCACTTTAAAA
GTTAACACTTGCCTTAAACGTGCATGATCCATCCCTCCGTGAAAGAGCAAGCATCGGTTC
CTATTCCAGTGGAACCAGTTGGTGGGAAGGCAGCCGCGGTTGGGGCTGCAGACAAGGAGG
CGGAGGCTGTGCTGTAAGTAAACCCCGCAAAGCAGAGGCAGCCAGAGACGTCTTCTGTTT
TCAAGTGGAGTCCCCAAGTGGCTTGCTGTGCCTGTGTCCCTCTGTAGCATCCATGTGCTT
TTATTCCCGTTTCGCTTTATAGACCTGTGTGTAATTCCAGCTGAGATCTAATTATACCAT
CAATGTAATTGCTCGGTGTTCTTTCAGATTGTCACGGTACAGATATTTGAAGCTGAAAAG
GATGTACTTCCTGTTCAGCTGCCTCACGCTCTGGAGGCTTTAGCTGGAGTTTGTCAGCTG
TT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATATAACTGAGCAGAAATATAGACCAGTTACTAGTTCTTGAGTGAGTGTTTCCGGAGAA
CTTCTGTCAGGTTTGAAACCACAAAAGGAAATGAGCTTGTGCCTCTGTCTCACTTTAAAA
GTTAACACTTGCCTTAAACGTGCATGATCCATCCCTCCGTGAAAGAGCAAGCATCGGTTC
CTATTCCAGTGGAACCAGTTGGTGGGAAGGCAGCCGCGGTTGGGGCTGCAGACAAGGAGG
CGGAGGCTGTGCTGTAAGTAAACCCCGCAAAGCAGAGGCAGCCAGAGACGTCTTCTGTTT
TCAAGTGGAGTCCCCAAGTGGCTTGCTGTGCCTGTGTCCCTCTGTAGCATCCATGTGCTT
TTATTCCCGTTTCGCTTTATAGACCTGTGTGTAATTCCAGCTGAGATCTAATTATACCAT
CAATGTAATTGCTCGGTGTTCTTTCAGATTGTCACGGTACAGATATTTGAAGCTGAAAAG
GATGTACTTCCTGTTCAGCTGCCTCACGCTCTGGAGGCTTTAGCTGGAGTTTGTCAGCTG
TT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-542, gnl|bosTau2|chr9 (51998456-51998998)
               

               
               1-542, gnl|Hg17|chr6 (152598773-152598233)
               

               
               1-542, gnl|Mm7|chr10 (5266549-5267141)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-542, gnl|bosTau2|chr9 (51998456-51998998)
               

               
               1-542, gnl|Hg17|chr6 (152598773-152598233)
               

               
               1-542, gnl|Mm7|chr10 (5266549-5267141)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-542, gnl\|bosTau2\|chr9 (51998456-51998998)
	1-542, gnl\|Hg17\|chr6 (152598773-152598233)
	1-542, gnl\|Mm7\|chr10 (5266549-5267141)