Non-Coding RNA Search

rpigca0_003292.y1

Sequence:


               
               CACTTTGGAAAGTCACATGCTGGGATTCTACTATGTCCTAGAAACTGTCTTAATTCATTT
CCCCCTTTGCTTTTGCTTGAGTAGAAAGAAAAAAAAAAAAAAGATAGTCAATGCTAATAA
TTGTGGCATGTAATGTAATTGGAAGTGTTTCATTGACATGCTCGTGAGAGTTTCCGGCTC
ATCCTCGGCTTGGATGTAGCACTAGGCTTGCCTTGAGTGTCTTGCAGGAGCCTTTGAAGC
AGGTGGACCATATTATAAATAGGCGCGTTGCTATGGTGAGGATGGCAGTCCTTGCTTGCA
GTGGGTAACCTTTTCTACCTTCTTGGACACTGTTTTAAAACAGCAGCCTGATAGCATTTC
ATCTCATCTGGACCGAGGTGGGGGTAGAGGAATCAGTGAGAACGAGGTCTGAACATTTTT
TTTTGAGATGATGTTTTAGGGGTTTTGGCTCACCTGGCGCTGTGGGATATTTTGGAGATC
CGGCTTTCTCGTGATTTATTTAGAAATATGTTTTCTAATGAATGGGATGGGGGGATGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACTTTGGAAAGTCACATGCTGGGATTCTACTATGTCCTAGAAACTGTCTTAATTCATTT
CCCCCTTTGCTTTTGCTTGAGTAGAAAGAAAAAAAAAAAAAAGATAGTCAATGCTAATAA
TTGTGGCATGTAATGTAATTGGAAGTGTTTCATTGACATGCTCGTGAGAGTTTCCGGCTC
ATCCTCGGCTTGGATGTAGCACTAGGCTTGCCTTGAGTGTCTTGCAGGAGCCTTTGAAGC
AGGTGGACCATATTATAAATAGGCGCGTTGCTATGGTGAGGATGGCAGTCCTTGCTTGCA
GTGGGTAACCTTTTCTACCTTCTTGGACACTGTTTTAAAACAGCAGCCTGATAGCATTTC
ATCTCATCTGGACCGAGGTGGGGGTAGAGGAATCAGTGAGAACGAGGTCTGAACATTTTT
TTTTGAGATGATGTTTTAGGGGTTTTGGCTCACCTGGCGCTGTGGGATATTTTGGAGATC
CGGCTTTCTCGTGATTTATTTAGAAATATGTTTTCTAATGAATGGGATGGGGGGATGGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-540, gnl|bosTau2|chr26 (22316698-22317240)
               

               
               1-540, gnl|Hg17|chr10 (114739139-114739672)
               

               
               1-540, gnl|Mm7|chr19 (55692752-55693292)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr26 (22316698-22317240)
               

               
               1-540, gnl|Hg17|chr10 (114739139-114739672)
               

               
               1-540, gnl|Mm7|chr19 (55692752-55693292)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-540, gnl\|bosTau2\|chr26 (22316698-22317240)
	1-540, gnl\|Hg17\|chr10 (114739139-114739672)
	1-540, gnl\|Mm7\|chr19 (55692752-55693292)