rpigca0_003483.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGATTGAGCAGCTGGACAAGACCCTGGCCCGCGTGGTGGAGGGCTGGAACCGGCATGAAG CTGAGCTGAACAGAGGTGCTTCGGGGACTCCAGGAGGAACGCCAGGCGGCTGAACTCACT AGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCTGTGGAG GCCCTGAACCGGGAGCAGGAAGGTGCCAGACTGCAGCAACGGGAAAGAGAGACATTGGAA GAGGAGAGGCAGGCTCTGACCCTGAGCTTGGAGCTGGAACAGCAGCGGTGCCGGGCCTTG CAGGAAGAACGGGATGAGGCTCGGGCCGGGCAGCTCAGTGAGCGTCGACACTTGGAGACA CTTCAGGCGGCCCTAGAGGAAGAACGGCAGACCTGGGCCCAGCAGGAGCATCAGCTCCAG GAACGCTACCAGGCGCTGCAGGAGGAGAGCCAGGCTCAGCTGGAAAGGGAGAGGGGCAGC TCCCAGAGGGAGGCCCAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGATTGAGCAGCTGGACAAGACCCTGGCCCGCGTGGTGGAGGGCTGGAACCGGCATGAAG CTGAGCTGAACAGAGGTGCTTCGGGGACTCCAGGAGGAACGCCAGGCGGCTGAACTCACT AGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCTGTGGAG GCCCTGAACCGGGAGCAGGAAGGTGCCAGACTGCAGCAACGGGAAAGAGAGACATTGGAA GAGGAGAGGCAGGCTCTGACCCTGAGCTTGGAGCTGGAACAGCAGCGGTGCCGGGCCTTG CAGGAAGAACGGGATGAGGCTCGGGCCGGGCAGCTCAGTGAGCGTCGACACTTGGAGACA CTTCAGGCGGCCCTAGAGGAAGAACGGCAGACCTGGGCCCAGCAGGAGCATCAGCTCCAG GAACGCTACCAGGCGCTGCAGGAGGAGAGCCAGGCTCAGCTGGAAAGGGAGAGGGGCAGC TCCCAGAGGGAGGCCCAGG |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 19-138, gnl|bosTau2|chr19 (15276842-15276724) | |
| 19-138, gnl|canFam2|chr5 (35785182-35785280) | |
| 19-138, gnl|danRer3|chr22 (43970467-43970563) | |
| 19-138, gnl|echTel1|scaffold_319550 (52111-52209) | |
| 19-138, gnl|hg17|chr17 (7780739-7780837) | |
| 19-138, gnl|Hg17|chr17 (7780742-7780860) | |
| 19-138, gnl|mm7|chr11 (69401050-69400952) | |
| 19-138, gnl|Mm7|chr11 (69401045-69400927) | |
| 19-138, gnl|monDom2|scaffold_66 (5175830-5175947) | |
| 19-138, gnl|oryCun1|scaffold_176224 (29163-29261) | |
| 19-138, gnl|panTro1|chr19_random (43958984-43958886) | |
| 19-138, gnl|rheMac2|chr16 (7687547-7687645) | |
| 19-138, gnl|rn3|chr10 (56126616-56126518) | |
| 19-138, gnl|xenTro1|scaffold_814 (74951-75049) | |
| 237-475, gnl|bosTau2|chr19 (15275288-15275050) | |
| 237-475, gnl|canFam2|chr5 (35786705-35786973) | |
| 237-475, gnl|dasNov1|scaffold_12367 (20852-21126) | |
| 237-475, gnl|echTel1|scaffold_319550 (53569-53844) | |
| 237-475, gnl|hg17|chr17 (7783519-7783794) | |
| 237-475, gnl|Hg17|chr17 (7783555-7783793) | |
| 237-475, gnl|mm7|chr11 (69397037-69396764) | |
| 237-475, gnl|Mm7|chr11 (69397001-69396763) | |
| 237-475, gnl|monDom2|scaffold_66 (5180786-5181054) | |
| 237-475, gnl|oryCun1|scaffold_176224 (30878-31149) | |
| 237-475, gnl|panTro1|chr19_random (43955321-43955046) | |
| 237-475, gnl|rheMac2|chr16 (7690590-7690865) | |
| 237-475, gnl|rn3|chr10 (56123400-56123127) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 19-138, gnl|bosTau2|chr19 (15276842-15276724) | |
| 19-138, gnl|canFam2|chr5 (35785182-35785280) | |
| 19-138, gnl|danRer3|chr22 (43970467-43970563) | |
| 19-138, gnl|echTel1|scaffold_319550 (52111-52209) | |
| 19-138, gnl|hg17|chr17 (7780739-7780837) | |
| 19-138, gnl|Hg17|chr17 (7780742-7780860) | |
| 19-138, gnl|mm7|chr11 (69401050-69400952) | |
| 19-138, gnl|Mm7|chr11 (69401045-69400927) | |
| 19-138, gnl|monDom2|scaffold_66 (5175830-5175947) | |
| 19-138, gnl|oryCun1|scaffold_176224 (29163-29261) | |
| 19-138, gnl|panTro1|chr19_random (43958984-43958886) | |
| 19-138, gnl|rheMac2|chr16 (7687547-7687645) | |
| 19-138, gnl|rn3|chr10 (56126616-56126518) | |
| 19-138, gnl|xenTro1|scaffold_814 (74951-75049) | |
| 237-475, gnl|bosTau2|chr19 (15275288-15275050) | |
| 237-475, gnl|canFam2|chr5 (35786705-35786973) | |
| 237-475, gnl|dasNov1|scaffold_12367 (20852-21126) | |
| 237-475, gnl|echTel1|scaffold_319550 (53569-53844) | |
| 237-475, gnl|hg17|chr17 (7783519-7783794) | |
| 237-475, gnl|Hg17|chr17 (7783555-7783793) | |
| 237-475, gnl|mm7|chr11 (69397037-69396764) | |
| 237-475, gnl|Mm7|chr11 (69397001-69396763) | |
| 237-475, gnl|monDom2|scaffold_66 (5180786-5181054) | |
| 237-475, gnl|oryCun1|scaffold_176224 (30878-31149) | |
| 237-475, gnl|panTro1|chr19_random (43955321-43955046) | |
| 237-475, gnl|rheMac2|chr16 (7690590-7690865) | |
| 237-475, gnl|rn3|chr10 (56123400-56123127) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) |