Non-Coding RNA Search

rpigca0_003988.y1

Sequence:


               
               ATGAAAATTACAGAGCACCTATATTCTATGCTGTTGAGGAAATGAGAACAGCCCTAGGGC
CATGTCAAATCTTGGTGAAAATTCTAATTTACTCACTTACTGACTGTAGCTCTTGACTTT
GTGTCAAAATTATTTTATCTCTACCAACTTCTGTAATTGCAACTAAATAGGACATTTTGG
GGGGTCTTATTTTTTTagggcatcatccgtggcctatggaaagtcccagcctagggggtt
gaatcggagctgtagctgccagcctgcgccatagccacagcaacacgggatctgagccat
gtctgtgacctacactgcagctcgcaacagtgccagatccttaacccaTTTAGGAGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGAAAATTACAGAGCACCTATATTCTATGCTGTTGAGGAAATGAGAACAGCCCTAGGGC
CATGTCAAATCTTGGTGAAAATTCTAATTTACTCACTTACTGACTGTAGCTCTTGACTTT
GTGTCAAAATTATTTTATCTCTACCAACTTCTGTAATTGCAACTAAATAGGACATTTTGG
GGGGTCTTATTTTTTTagggcatcatccgtggcctatggaaagtcccagcctagggggtt
gaatcggagctgtagctgccagcctgcgccatagccacagcaacacgggatctgagccat
gtctgtgacctacactgcagctcgcaacagtgccagatccttaacccaTTTAGGAGGCC

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

Help | Less info


               
               2-170, gnl|bosTau2|chr12 (39319979-39319814)
               

               
               2-170, gnl|canFam2|chr22 (50777386-50777509)
               

               
               2-170, gnl|hg17|chr13 (96932652-96932774)
               

               
               2-170, gnl|Hg17|chr13 (96932663-96932829)
               

               
               2-170, gnl|loxAfr1|scaffold_39379 (7754-7627)
               

               
               2-170, gnl|panTro1|chr14 (80145880-80146002)
               

               
               2-170, gnl|rheMac2|chr17 (77900868-77900990)

Aligned organism(s): 7 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-170, gnl|bosTau2|chr12 (39319979-39319814)
               

               
               2-170, gnl|canFam2|chr22 (50777386-50777509)
               

               
               2-170, gnl|hg17|chr13 (96932652-96932774)
               

               
               2-170, gnl|Hg17|chr13 (96932663-96932829)
               

               
               2-170, gnl|loxAfr1|scaffold_39379 (7754-7627)
               

               
               2-170, gnl|panTro1|chr14 (80145880-80146002)
               

               
               2-170, gnl|rheMac2|chr17 (77900868-77900990)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               clu (0.119646)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	2-170, gnl\|bosTau2\|chr12 (39319979-39319814)
	2-170, gnl\|canFam2\|chr22 (50777386-50777509)
	2-170, gnl\|hg17\|chr13 (96932652-96932774)
	2-170, gnl\|Hg17\|chr13 (96932663-96932829)
	2-170, gnl\|loxAfr1\|scaffold_39379 (7754-7627)
	2-170, gnl\|panTro1\|chr14 (80145880-80146002)
	2-170, gnl\|rheMac2\|chr17 (77900868-77900990)