Non-Coding RNA Search

rpigca_010008.y1

Sequence:


               
               TCAGGAAATGCCTAGCGGGCCGACTGACCGAGAGGAGATAGCGGAGGCCTGGGAGACCCC
GCGCTCGTGCCGTTCCCAGCGTCCGGCCGCGTGGCCCTTGGCTGGCCTGGTTTGGGCCCC
ATGAGCTCACCCCCCGCCCCCCACAGCCTCCCCGCGTCTGGTCTCCTCTCTGGGCCCTGC
TGTCCCTCCTGACGGGGGACAGAGCCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGGAAATGCCTAGCGGGCCGACTGACCGAGAGGAGATAGCGGAGGCCTGGGAGACCCC
GCGCTCGTGCCGTTCCCAGCGTCCGGCCGCGTGGCCCTTGGCTGGCCTGGTTTGGGCCCC
ATGAGCTCACCCCCCGCCCCCCACAGCCTCCCCGCGTCTGGTCTCCTCTCTGGGCCCTGC
TGTCCCTCCTGACGGGGGACAGAGCCCTCC

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-178, gnl|bosTau2|chr29 (44188931-44188753)
               

               
               1-178, gnl|hg17|chr11 (1971502-1972014)
               

               
               1-178, gnl|Hg17|chr11 (1971955-1971765)
               

               
               1-178, gnl|mm7|chr7 (139001367-139001750)
               

               
               1-178, gnl|rheMac2|chr14 (1905048-1905559)
               

               
               1-178, gnl|rn3|chr1 (203008519-203008915)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-178, gnl|bosTau2|chr29 (44188931-44188753)
               

               
               1-178, gnl|hg17|chr11 (1971502-1972014)
               

               
               1-178, gnl|Hg17|chr11 (1971955-1971765)
               

               
               1-178, gnl|mm7|chr7 (139001367-139001750)
               

               
               1-178, gnl|rheMac2|chr14 (1905048-1905559)
               

               
               1-178, gnl|rn3|chr1 (203008519-203008915)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-178, gnl\|bosTau2\|chr29 (44188931-44188753)
	1-178, gnl\|hg17\|chr11 (1971502-1972014)
	1-178, gnl\|Hg17\|chr11 (1971955-1971765)
	1-178, gnl\|mm7\|chr7 (139001367-139001750)
	1-178, gnl\|rheMac2\|chr14 (1905048-1905559)
	1-178, gnl\|rn3\|chr1 (203008519-203008915)