Non-Coding RNA Search

rpigca_0832.y1

Sequence:


               
               AAAAAAATAATCTTTTAACTTTCTATTGTTTTGAGTTCTGAGAAAGAAAGTCTAAACGCA
AGTGAGGAGAATATGCTCACTTCATCCTTGTTATTCTCTCTCTCTCTCTTTTTTGGATGC
AAATGGCATACTAGCCATCCAGAAAATTGAGGCTTCTGGAACTACTGGCCATCTTTCTTT
GCAGGACAGTTTCTGGGCCAAGCAAATAAATATTCACCTGTTATGGTAGGGAAGCTTCTC
CCAGCAACTTTGCTATTAAAAAGGGGGCATTATGTGATAAAGTATAGGGAATAGTAAGGA
GGGGCCCAAATGTCACTATACATATATATATATGTATATATGGCCTTGTTCACATTAGAT
AAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAATAATCTTTTAACTTTCTATTGTTTTGAGTTCTGAGAAAGAAAGTCTAAACGCA
AGTGAGGAGAATATGCTCACTTCATCCTTGTTATTCTCTCTCTCTCTCTTTTTTGGATGC
AAATGGCATACTAGCCATCCAGAAAATTGAGGCTTCTGGAACTACTGGCCATCTTTCTTT
GCAGGACAGTTTCTGGGCCAAGCAAATAAATATTCACCTGTTATGGTAGGGAAGCTTCTC
CCAGCAACTTTGCTATTAAAAAGGGGGCATTATGTGATAAAGTATAGGGAATAGTAAGGA
GGGGCCCAAATGTCACTATACATATATATATATGTATATATGGCCTTGTTCACATTAGAT
AAC

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               46-267, gnl|bosTau2|chr23 (22085294-22085516)
               

               
               46-267, gnl|canFam2|chr12 (21116361-21116676)
               

               
               46-267, gnl|dasNov1|scaffold_71349 (4118-3804)
               

               
               46-267, gnl|hg17|chr6 (50397280-50397588)
               

               
               46-267, gnl|Hg17|chr6 (50397494-50397289)
               

               
               46-267, gnl|mm7|chr1 (18764058-18764268)
               

               
               46-267, gnl|oryCun1|scaffold_187120 (7222-6907)
               

               
               46-267, gnl|panTro1|chr5_random (30084082-30083774)
               

               
               46-267, gnl|rheMac2|chr4 (50033453-50033756)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-267, gnl|bosTau2|chr23 (22085294-22085516)
               

               
               46-267, gnl|canFam2|chr12 (21116361-21116676)
               

               
               46-267, gnl|dasNov1|scaffold_71349 (4118-3804)
               

               
               46-267, gnl|hg17|chr6 (50397280-50397588)
               

               
               46-267, gnl|Hg17|chr6 (50397494-50397289)
               

               
               46-267, gnl|mm7|chr1 (18764058-18764268)
               

               
               46-267, gnl|oryCun1|scaffold_187120 (7222-6907)
               

               
               46-267, gnl|panTro1|chr5_random (30084082-30083774)
               

               
               46-267, gnl|rheMac2|chr4 (50033453-50033756)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	46-267, gnl\|bosTau2\|chr23 (22085294-22085516)
	46-267, gnl\|canFam2\|chr12 (21116361-21116676)
	46-267, gnl\|dasNov1\|scaffold_71349 (4118-3804)
	46-267, gnl\|hg17\|chr6 (50397280-50397588)
	46-267, gnl\|Hg17\|chr6 (50397494-50397289)
	46-267, gnl\|mm7\|chr1 (18764058-18764268)
	46-267, gnl\|oryCun1\|scaffold_187120 (7222-6907)
	46-267, gnl\|panTro1\|chr5_random (30084082-30083774)
	46-267, gnl\|rheMac2\|chr4 (50033453-50033756)