Non-Coding RNA Search

rpigca_0916.y1

Sequence:


               
               ACAAACTTGCGAAGCCACCTTCGGGAACCGGGGCGGCCCGCGGGAGGGCCAGTCTCCCCC
CCCAGCCTGAGCGTTCACATGCTCCACTGCGTGGGGAGAAAGGGCTGTTTGTCCCCGTTC
TCAGTTTGCACAGCACCTCGGATGCGTTTTTAAAGATAAGCCGCCCAGGGAACAAAGACG
CGTCAGAGAGGGAGGGGGGCGCCGGAGGTGGGGGGAGCCTTGGCCCGCCGTTTGGGCTTT
TTGTGGGTGGAGGACACACATCTTGGGTGTTTCCTGGACGAGATCGCTGACAAAGGTGAA
TTCAGAGGGACTTAGGCCCTGCCCCCCCCCCCCTCCCCCTCAGGCGTCCAGCATCTGCCG
GGCCGCCATCCACTACGGCATCCTGGACGACAAGGGAGGCCTGGTGGACGTCACCAGGAA
CGGCAAGGTCCCCTTTTTCGTCAAGTCCGAGAGAAACGGCGTGCAGTCTCTGAGCAAATA
CAAGGCTTCCAGCTCATTCACGGTGTCCAAAGTGAAAGTGCAGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAACTTGCGAAGCCACCTTCGGGAACCGGGGCGGCCCGCGGGAGGGCCAGTCTCCCCC
CCCAGCCTGAGCGTTCACATGCTCCACTGCGTGGGGAGAAAGGGCTGTTTGTCCCCGTTC
TCAGTTTGCACAGCACCTCGGATGCGTTTTTAAAGATAAGCCGCCCAGGGAACAAAGACG
CGTCAGAGAGGGAGGGGGGCGCCGGAGGTGGGGGGAGCCTTGGCCCGCCGTTTGGGCTTT
TTGTGGGTGGAGGACACACATCTTGGGTGTTTCCTGGACGAGATCGCTGACAAAGGTGAA
TTCAGAGGGACTTAGGCCCTGCCCCCCCCCCCCTCCCCCTCAGGCGTCCAGCATCTGCCG
GGCCGCCATCCACTACGGCATCCTGGACGACAAGGGAGGCCTGGTGGACGTCACCAGGAA
CGGCAAGGTCCCCTTTTTCGTCAAGTCCGAGAGAAACGGCGTGCAGTCTCTGAGCAAATA
CAAGGCTTCCAGCTCATTCACGGTGTCCAAAGTGAAAGTGCAGGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr18 (11865759-11865288)
               

               
               1-480, gnl|Hg17|chr16 (83463771-83464236)
               

               
               1-480, gnl|Mm7|chr8 (118664700-118665106)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr18 (11865759-11865288)
               

               
               1-480, gnl|Hg17|chr16 (83463771-83464236)
               

               
               1-480, gnl|Mm7|chr8 (118664700-118665106)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	1-480, gnl\|bosTau2\|chr18 (11865759-11865288)
	1-480, gnl\|Hg17\|chr16 (83463771-83464236)
	1-480, gnl\|Mm7\|chr8 (118664700-118665106)