rpigca_0959.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCGTGCGCTCGGGGAGGAGGCCCTGCTGCGATACGTTCTGTCCGTGAACGAAGAGGGGC TCAGGCGATGCGAGGACAACACCAAGGTCTTCGGCCGGCCGATCAGCTCCTGGACCTGCC TGGTGGACCTGGAGGGGCTGAACATGCGGCACCTGTGGCGGCCGGGCGTGAAGGCGCTGC TGCGCATCATCGAGGTGGTGGAGGCCAACTACCCCGAGACGCTGGGCCGCCTGCTGATCC TGCGCGCCCCCAGGGTGTTCCCCGTGCTCTGGACGCTGGTTAGCCCATTCATCGATGACA ACACCCGGAGGAAATTCCTCATTTATGCGGGAAATGACTACCAGGGGCCCGGAGGCCTGC TGGATTACATCGACAAGGAGATCATCCCCGACTTCCTGAGCGGGGAGTGCATGTGTGAAG TGCCCGAGGGGGGCCTGGTGCCCAAGTCTCTGTACAGGACGGCAGAGGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCGTGCGCTCGGGGAGGAGGCCCTGCTGCGATACGTTCTGTCCGTGAACGAAGAGGGGC TCAGGCGATGCGAGGACAACACCAAGGTCTTCGGCCGGCCGATCAGCTCCTGGACCTGCC TGGTGGACCTGGAGGGGCTGAACATGCGGCACCTGTGGCGGCCGGGCGTGAAGGCGCTGC TGCGCATCATCGAGGTGGTGGAGGCCAACTACCCCGAGACGCTGGGCCGCCTGCTGATCC TGCGCGCCCCCAGGGTGTTCCCCGTGCTCTGGACGCTGGTTAGCCCATTCATCGATGACA ACACCCGGAGGAAATTCCTCATTTATGCGGGAAATGACTACCAGGGGCCCGGAGGCCTGC TGGATTACATCGACAAGGAGATCATCCCCGACTTCCTGAGCGGGGAGTGCATGTGTGAAG TGCCCGAGGGGGGCCTGGTGCCCAAGTCTCTGTACAGGACGGCAGAGGAGC |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 104-285, gnl|bosTau2|chr19 (48672063-48671882) | |
| 104-285, gnl|canFam2|chr9 (6690535-6690337) | |
| 104-285, gnl|canFam2|chr9 (6690518-6690345) | |
| 104-285, gnl|danRer3|chrNA (240654682-240654484) | |
| 104-285, gnl|danRer3|chrNA (240654658-240654492) | |
| 104-285, gnl|dasNov1|scaffold_4511 (15168-14973) | |
| 104-285, gnl|dasNov1|scaffold_4511 (15152-14981) | |
| 104-285, gnl|echTel1|scaffold_278324 (8946-9130) | |
| 104-285, gnl|echTel1|scaffold_278324 (8950-9123) | |
| 104-285, gnl|fr1|chrUn (153574709-153574518) | |
| 104-285, gnl|fr1|chrUn (153574690-153574539) | |
| 104-285, gnl|galGal2|chr18 (3918669-3918473) | |
| 104-285, gnl|galGal2|chr18 (3918654-3918481) | |
| 104-285, gnl|hg17|chr11 (43876723-43876896) | |
| 104-285, gnl|hg17|chr17 (72713887-72714085) | |
| 104-285, gnl|Hg17|chr17 (72713903-72714093) | |
| 104-285, gnl|loxAfr1|scaffold_41949 (14130-13933) | |
| 104-285, gnl|loxAfr1|scaffold_41949 (14114-13941) | |
| 104-285, gnl|mm7|chr11 (117259185-117259383) | |
| 104-285, gnl|mm7|chr11 (117259203-117259375) | |
| 104-285, gnl|Mm7|chr11 (117259201-117259382) | |
| 104-285, gnl|monDom2|scaffold_18 (4819469-4819667) | |
| 104-285, gnl|monDom2|scaffold_18 (4819486-4819659) | |
| 104-285, gnl|oryCun1|scaffold_103875 (5588-5406) | |
| 104-285, gnl|oryCun1|scaffold_103875 (5584-5412) | |
| 104-285, gnl|panTro1|chr19 (76098066-76098264) | |
| 104-285, gnl|panTro1|chr9 (44372204-44372377) | |
| 104-285, gnl|rheMac2|chr14 (28212683-28212510) | |
| 104-285, gnl|rheMac2|chr16 (72542229-72542426) | |
| 104-285, gnl|rn3|chr10 (107274189-107274387) | |
| 104-285, gnl|rn3|chr10 (107274207-107274376) | |
| 104-285, gnl|tetNig1|chrUn_random (39663126-39662946) | |
| 104-285, gnl|tetNig1|chrUn_random (7913779-7913613) | |
| 104-285, gnl|xenTro1|scaffold_135 (1511753-1511572) | |
| 104-285, gnl|xenTro1|scaffold_135 (1511753-1511580) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 104-285, gnl|bosTau2|chr19 (48672063-48671882) | |
| 104-285, gnl|canFam2|chr9 (6690535-6690337) | |
| 104-285, gnl|canFam2|chr9 (6690518-6690345) | |
| 104-285, gnl|danRer3|chrNA (240654682-240654484) | |
| 104-285, gnl|danRer3|chrNA (240654658-240654492) | |
| 104-285, gnl|dasNov1|scaffold_4511 (15168-14973) | |
| 104-285, gnl|dasNov1|scaffold_4511 (15152-14981) | |
| 104-285, gnl|echTel1|scaffold_278324 (8946-9130) | |
| 104-285, gnl|echTel1|scaffold_278324 (8950-9123) | |
| 104-285, gnl|fr1|chrUn (153574709-153574518) | |
| 104-285, gnl|fr1|chrUn (153574690-153574539) | |
| 104-285, gnl|galGal2|chr18 (3918669-3918473) | |
| 104-285, gnl|galGal2|chr18 (3918654-3918481) | |
| 104-285, gnl|hg17|chr11 (43876723-43876896) | |
| 104-285, gnl|hg17|chr17 (72713887-72714085) | |
| 104-285, gnl|Hg17|chr17 (72713903-72714093) | |
| 104-285, gnl|loxAfr1|scaffold_41949 (14130-13933) | |
| 104-285, gnl|loxAfr1|scaffold_41949 (14114-13941) | |
| 104-285, gnl|mm7|chr11 (117259185-117259383) | |
| 104-285, gnl|mm7|chr11 (117259203-117259375) | |
| 104-285, gnl|Mm7|chr11 (117259201-117259382) | |
| 104-285, gnl|monDom2|scaffold_18 (4819469-4819667) | |
| 104-285, gnl|monDom2|scaffold_18 (4819486-4819659) | |
| 104-285, gnl|oryCun1|scaffold_103875 (5588-5406) | |
| 104-285, gnl|oryCun1|scaffold_103875 (5584-5412) | |
| 104-285, gnl|panTro1|chr19 (76098066-76098264) | |
| 104-285, gnl|panTro1|chr9 (44372204-44372377) | |
| 104-285, gnl|rheMac2|chr14 (28212683-28212510) | |
| 104-285, gnl|rheMac2|chr16 (72542229-72542426) | |
| 104-285, gnl|rn3|chr10 (107274189-107274387) | |
| 104-285, gnl|rn3|chr10 (107274207-107274376) | |
| 104-285, gnl|tetNig1|chrUn_random (39663126-39662946) | |
| 104-285, gnl|tetNig1|chrUn_random (7913779-7913613) | |
| 104-285, gnl|xenTro1|scaffold_135 (1511753-1511572) | |
| 104-285, gnl|xenTro1|scaffold_135 (1511753-1511580) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.119646) |