Non-Coding RNA Search

rpigca_1115.y1

Sequence:


               
               TCTCTTTTGCCAATGGCTCAGCACCGAATCAGACACCTGCCTTCTTCTCCATTCCAGTGA
CCTGGTTGTATTGCTGCCGACTCAATATATATATATATGTTGGCCATAATAAAATATGTG
GAAAGTTCCTGAAAACTATTTTTAAAAATACTGAAAGTGATAAATTGATCTGGATAATGG
TAAGCATATATCATTCTGTTGTAACTTATAGATTTATAATTTAGTCTCCCTTCAGAAATA
ATTTCTGAATGCAGCTCTCTCCTGGAATTTAGAAAGAGGCTTATCTGTCTCTTTAGAGGC
AGAAATTCTACTATGTTTATTTTCCTATTAATACTATTGAGTATTATTGAAGACCAAGAA
ATTTCTGTTTCGGCAAGGCAGAAAAGTTTGGCTTTTAACACTTTATTGGTCACACTGAGA
CAGAAACCTACAGCCTTAAAAGAAATTATTCATGGAAGAAATAACCTTATGGTTACCAAA
AATGAAAGGGGAGGGGGAAGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCTTTTGCCAATGGCTCAGCACCGAATCAGACACCTGCCTTCTTCTCCATTCCAGTGA
CCTGGTTGTATTGCTGCCGACTCAATATATATATATATGTTGGCCATAATAAAATATGTG
GAAAGTTCCTGAAAACTATTTTTAAAAATACTGAAAGTGATAAATTGATCTGGATAATGG
TAAGCATATATCATTCTGTTGTAACTTATAGATTTATAATTTAGTCTCCCTTCAGAAATA
ATTTCTGAATGCAGCTCTCTCCTGGAATTTAGAAAGAGGCTTATCTGTCTCTTTAGAGGC
AGAAATTCTACTATGTTTATTTTCCTATTAATACTATTGAGTATTATTGAAGACCAAGAA
ATTTCTGTTTCGGCAAGGCAGAAAAGTTTGGCTTTTAACACTTTATTGGTCACACTGAGA
CAGAAACCTACAGCCTTAAAAGAAATTATTCATGGAAGAAATAACCTTATGGTTACCAAA
AATGAAAGGGGAGGGGGAAGGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               100-503, gnl|bosTau2|chr9 (48101250-48100844)
               

               
               100-503, gnl|Hg17|chr6 (143963292-143963664)
               

               
               100-503, gnl|Mm7|chr10 (13106394-13106049)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-503, gnl|bosTau2|chr9 (48101250-48100844)
               

               
               100-503, gnl|Hg17|chr6 (143963292-143963664)
               

               
               100-503, gnl|Mm7|chr10 (13106394-13106049)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	100-503, gnl\|bosTau2\|chr9 (48101250-48100844)
	100-503, gnl\|Hg17\|chr6 (143963292-143963664)
	100-503, gnl\|Mm7\|chr10 (13106394-13106049)