Non-Coding RNA Search

rpigca_1386.y1

Sequence:


               
               CTAGAAAAAACAAAAAAAAGCAAAAACAAAACAAACAAACCAACAAAAAATGGCCCTGCT
TAGTAGGAAAAGGCTGGTACTCCTTGTTAGGCCAAACTTCTAAAAGGCATTTAAAAACAA
AAACAAAACAAAAAAACCTTCCAGCAATCCTAATGCTCACATTTCGGAGACTAGAGAGAA
GATTTACGTCAGAACAAATGGGTGCTTTTGGAAGGCGGGATCCTAAGCCGTCTCAGGTTA
TTGTGCCCGTCATTGGACAGACTAGAGTCAAAACCACGAGCGTCACATGATGGTGGCCGT
GCAATATTTGTGCAACATCATCTGATATCATCGGATATCCTTGGGAGAAAAGCTTTTAAG
GAAGTCCGTGACCTGAAACTGGTAGGTTTGCTCGGACAGTCCTATCAGGTGATCGAGCGA
GTGAGCGCCAGGCGTCAGACACTTCAGTAGGACTTTGCTGGTATACTCCAGGCCTGGTTT
TGTAGCCAAAGCTCAGGGGATGGAATTTAAATGAGCCCCACCCTGAAAAGCTCCAGTGTA
GAGCCACTTGTTTTTTTCCAAGTCCCAAAGCTCCTTAGTGACCAATAAAGCTACCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGAAAAAACAAAAAAAAGCAAAAACAAAACAAACAAACCAACAAAAAATGGCCCTGCT
TAGTAGGAAAAGGCTGGTACTCCTTGTTAGGCCAAACTTCTAAAAGGCATTTAAAAACAA
AAACAAAACAAAAAAACCTTCCAGCAATCCTAATGCTCACATTTCGGAGACTAGAGAGAA
GATTTACGTCAGAACAAATGGGTGCTTTTGGAAGGCGGGATCCTAAGCCGTCTCAGGTTA
TTGTGCCCGTCATTGGACAGACTAGAGTCAAAACCACGAGCGTCACATGATGGTGGCCGT
GCAATATTTGTGCAACATCATCTGATATCATCGGATATCCTTGGGAGAAAAGCTTTTAAG
GAAGTCCGTGACCTGAAACTGGTAGGTTTGCTCGGACAGTCCTATCAGGTGATCGAGCGA
GTGAGCGCCAGGCGTCAGACACTTCAGTAGGACTTTGCTGGTATACTCCAGGCCTGGTTT
TGTAGCCAAAGCTCAGGGGATGGAATTTAAATGAGCCCCACCCTGAAAAGCTCCAGTGTA
GAGCCACTTGTTTTTTTCCAAGTCCCAAAGCTCCTTAGTGACCAATAAAGCTACCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               47-586, gnl|bosTau2|chr6 (47788139-47788658)
               

               
               47-586, gnl|Hg17|chr4 (77867145-77867988)
               

               
               47-586, gnl|Mm7|chr5 (92798866-92799351)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-586, gnl|bosTau2|chr6 (47788139-47788658)
               

               
               47-586, gnl|Hg17|chr4 (77867145-77867988)
               

               
               47-586, gnl|Mm7|chr5 (92798866-92799351)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	47-586, gnl\|bosTau2\|chr6 (47788139-47788658)
	47-586, gnl\|Hg17\|chr4 (77867145-77867988)
	47-586, gnl\|Mm7\|chr5 (92798866-92799351)