Non-Coding RNA Search

rpigca_1916.y1

Sequence:


               
               CGGGAACCTGAATGACAAAAAAGTGGCCTTTTCCCTGTGGGAAGTCTGGAATAGTCATTG
ATACAAAGAGAATCTATTCTGTGTGCTTCACAGAAAAAGACACAGGAAAAATTTTTAACT
GCATGCTAACATTCATATCCCTATGTGTGAACAGTGTCATTTTAAAAAGGACACAGAATA
GATTAGGAGGAATTAATCCTTCTCTTGATAATCTCAAAATGTGATCTGGACAAAGTAACA
GGGATCTCAGTCAAGTAAGTGTTGAACGTGGAGGTAAATGTTTTTTTTTTTTTACCTTTT
TGTTGTATTTGTTATATTTAATTGTTTTTTATAATGAACCTACCTTGTATTCCCAGAAGA
AAATTCCCTACTTGTCAAGAATATTGAATAAGATCTAGTAAATTTGCTGTTTTAATATTT
TATTTTCTGTTTTATTTGATTTTGTACTACTTTGTTTCTATGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGAACCTGAATGACAAAAAAGTGGCCTTTTCCCTGTGGGAAGTCTGGAATAGTCATTG
ATACAAAGAGAATCTATTCTGTGTGCTTCACAGAAAAAGACACAGGAAAAATTTTTAACT
GCATGCTAACATTCATATCCCTATGTGTGAACAGTGTCATTTTAAAAAGGACACAGAATA
GATTAGGAGGAATTAATCCTTCTCTTGATAATCTCAAAATGTGATCTGGACAAAGTAACA
GGGATCTCAGTCAAGTAAGTGTTGAACGTGGAGGTAAATGTTTTTTTTTTTTTACCTTTT
TGTTGTATTTGTTATATTTAATTGTTTTTTATAATGAACCTACCTTGTATTCCCAGAAGA
AAATTCCCTACTTGTCAAGAATATTGAATAAGATCTAGTAAATTTGCTGTTTTAATATTT
TATTTTCTGTTTTATTTGATTTTGTACTACTTTGTTTCTATGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               181-464, gnl|bosTau2|chr24 (5977652-5977927)
               

               
               181-464, gnl|Hg17|chrX (73277266-73276360)
               

               
               181-464, gnl|Mm7|chrX (98923366-98922960)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               181-464, gnl|bosTau2|chr24 (5977652-5977927)
               

               
               181-464, gnl|Hg17|chrX (73277266-73276360)
               

               
               181-464, gnl|Mm7|chrX (98923366-98922960)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	181-464, gnl\|bosTau2\|chr24 (5977652-5977927)
	181-464, gnl\|Hg17\|chrX (73277266-73276360)
	181-464, gnl\|Mm7\|chrX (98923366-98922960)