Non-Coding RNA Search

rpigca_2216.y1

Sequence:


               
               ctacaccacagctcacggcaatgccggatccttaaccgactgaacaaggccaggatcaaa
cccgcaacctcatggtttctagtcagcttcattaaccactgagccacgacaggaaTGCCT
CATTTATGTTCCGATGGGTTTTCAGAACAGAAAAAGCATACTATATACTGTCACATGAGA
ACAATACATAATAATGTCAAATTCAGTCACAGAGAGCCTTGCTACTCAAAATGTGGTCCA
CAGAGCAGATGTTCCAGCATTCCCTGGAGCTGTTAGAAGGGTACAATCTCAGGCCCAGTT
CAGAATATGTATTTTCTAAGGTCCCCTGGTGGTTCATATGAGCATCAAATGTTTAAACAG
CTTGACTGAAGTGTACTTGGCACATAAAGTGTCCGATTTGATACATTTGGTTGTACAGCT
ATACCCAGGAAACTCACCACAATTAAGATGGTGGACATAGCCGTCACCCCCCAACTACTT
CTACTTCTTGCCCTCTCCTGCCTGAGGTGACCTGTGTCACTATAGAGTCGGTCGAATTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ctacaccacagctcacggcaatgccggatccttaaccgactgaacaaggccaggatcaaa
cccgcaacctcatggtttctagtcagcttcattaaccactgagccacgacaggaaTGCCT
CATTTATGTTCCGATGGGTTTTCAGAACAGAAAAAGCATACTATATACTGTCACATGAGA
ACAATACATAATAATGTCAAATTCAGTCACAGAGAGCCTTGCTACTCAAAATGTGGTCCA
CAGAGCAGATGTTCCAGCATTCCCTGGAGCTGTTAGAAGGGTACAATCTCAGGCCCAGTT
CAGAATATGTATTTTCTAAGGTCCCCTGGTGGTTCATATGAGCATCAAATGTTTAAACAG
CTTGACTGAAGTGTACTTGGCACATAAAGTGTCCGATTTGATACATTTGGTTGTACAGCT
ATACCCAGGAAACTCACCACAATTAAGATGGTGGACATAGCCGTCACCCCCCAACTACTT
CTACTTCTTGCCCTCTCCTGCCTGAGGTGACCTGTGTCACTATAGAGTCGGTCGAATTTC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               122-446, gnl|bosTau2|chr4 (31169029-31168692)
               

               
               122-446, gnl|Hg17|chr4 (89709647-89710019)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               122-446, gnl|bosTau2|chr4 (31169029-31168692)
               

               
               122-446, gnl|Hg17|chr4 (89709647-89710019)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	122-446, gnl\|bosTau2\|chr4 (31169029-31168692)
	122-446, gnl\|Hg17\|chr4 (89709647-89710019)