Non-Coding RNA Search

rpigcb_0269.y1

Sequence:


               
               ATGTATATATATTTACGAGGTGACTGAGTTTGGGGCTGCAAAATGTAAGTGAGGTTGATT
CAGAAATCAGCTTCCTGGTGCCATGCGGGTTCTAAGGCCTGTTTCATCTCATGAGCCTGA
GCAGAAGACGGACTGGCCAGTGCTCACAGTGGATGACTTCCCCTCCCTGAACAAGAGATG
GG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTATATATATTTACGAGGTGACTGAGTTTGGGGCTGCAAAATGTAAGTGAGGTTGATT
CAGAAATCAGCTTCCTGGTGCCATGCGGGTTCTAAGGCCTGTTTCATCTCATGAGCCTGA
GCAGAAGACGGACTGGCCAGTGCTCACAGTGGATGACTTCCCCTCCCTGAACAAGAGATG
GG

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               41-182, gnl|bosTau2|chr7 (22373804-22373664)
               

               
               41-182, gnl|canFam2|chr11 (3128213-3128518)
               

               
               41-182, gnl|echTel1|scaffold_281964 (2586-2264)
               

               
               41-182, gnl|hg17|chr5 (180168452-180168777)
               

               
               41-182, gnl|Hg17|chr5 (180168695-180168555)
               

               
               41-182, gnl|loxAfr1|scaffold_32996 (47462-47795)
               

               
               41-182, gnl|mm7|chr11 (49202173-49201866)
               

               
               41-182, gnl|Mm7|chr11 (49201937-49202068)
               

               
               41-182, gnl|monDom2|scaffold_66 (1156778-1157093)
               

               
               41-182, gnl|oryCun1|scaffold_172057 (26634-26302)
               

               
               41-182, gnl|panTro1|chr4 (187710201-187710526)
               

               
               41-182, gnl|rn3|chr10 (34707479-34707174)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-182, gnl|bosTau2|chr7 (22373804-22373664)
               

               
               41-182, gnl|canFam2|chr11 (3128213-3128518)
               

               
               41-182, gnl|echTel1|scaffold_281964 (2586-2264)
               

               
               41-182, gnl|hg17|chr5 (180168452-180168777)
               

               
               41-182, gnl|Hg17|chr5 (180168695-180168555)
               

               
               41-182, gnl|loxAfr1|scaffold_32996 (47462-47795)
               

               
               41-182, gnl|mm7|chr11 (49202173-49201866)
               

               
               41-182, gnl|Mm7|chr11 (49201937-49202068)
               

               
               41-182, gnl|monDom2|scaffold_66 (1156778-1157093)
               

               
               41-182, gnl|oryCun1|scaffold_172057 (26634-26302)
               

               
               41-182, gnl|panTro1|chr4 (187710201-187710526)
               

               
               41-182, gnl|rn3|chr10 (34707479-34707174)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	41-182, gnl\|bosTau2\|chr7 (22373804-22373664)
	41-182, gnl\|canFam2\|chr11 (3128213-3128518)
	41-182, gnl\|echTel1\|scaffold_281964 (2586-2264)
	41-182, gnl\|hg17\|chr5 (180168452-180168777)
	41-182, gnl\|Hg17\|chr5 (180168695-180168555)
	41-182, gnl\|loxAfr1\|scaffold_32996 (47462-47795)
	41-182, gnl\|mm7\|chr11 (49202173-49201866)
	41-182, gnl\|Mm7\|chr11 (49201937-49202068)
	41-182, gnl\|monDom2\|scaffold_66 (1156778-1157093)
	41-182, gnl\|oryCun1\|scaffold_172057 (26634-26302)
	41-182, gnl\|panTro1\|chr4 (187710201-187710526)
	41-182, gnl\|rn3\|chr10 (34707479-34707174)