Non-Coding RNA Search

rpigcb_10110.y1

Sequence:


               
               ATCACGAATGCCTAGGGCACAGAGCTACCCGGATAATCATCAGGAATTTTCAGGTTAGAC
TGTCCACATTCTAAATGTTTACGTCATTAAATAACATTTTGGCTGGGAGGGAGAGGGAAG
AATTTTTTTTAGAAAAATCAAATAAAAATGTGTAAATGTATCTTACATCATTAGAAATAA
TCTGACTTTTTAAAGTAACATAAGTTTTTTATGTGTCTTAATAGACTACGATAACCCTAT
CTTTGAGAAATTTGGAAAAGGAGGAACATATCCAAGAAGGTATCATGTTTCATATCACCA
TCAAGACTATAATGATGGTAAGTTTTTGGCAATTAGATAAAAAAAGTTTGTTAAAAATCT
CAAAAATAATAAAAATAAATTTGTTCCTATACCACTTAGTTTTCTGCTTAAAAAGTTATT
TAAAGAGAagttcccttgtggcctagcagttaaggatccaacattgtcacttctgtggct
caggtcactgctgtggtgcagattctaaccatggtacaggaacttccatatgctgTAAGC
TCATCCTAAAGAGAAAGAATTTGAATCTTAACGAAACTGTAATAACATCTTAGCTTCATG
CCAACTTACCTTATAATACTTATCTTTCCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCACGAATGCCTAGGGCACAGAGCTACCCGGATAATCATCAGGAATTTTCAGGTTAGAC
TGTCCACATTCTAAATGTTTACGTCATTAAATAACATTTTGGCTGGGAGGGAGAGGGAAG
AATTTTTTTTAGAAAAATCAAATAAAAATGTGTAAATGTATCTTACATCATTAGAAATAA
TCTGACTTTTTAAAGTAACATAAGTTTTTTATGTGTCTTAATAGACTACGATAACCCTAT
CTTTGAGAAATTTGGAAAAGGAGGAACATATCCAAGAAGGTATCATGTTTCATATCACCA
TCAAGACTATAATGATGGTAAGTTTTTGGCAATTAGATAAAAAAAGTTTGTTAAAAATCT
CAAAAATAATAAAAATAAATTTGTTCCTATACCACTTAGTTTTCTGCTTAAAAAGTTATT
TAAAGAGAagttcccttgtggcctagcagttaaggatccaacattgtcacttctgtggct
caggtcactgctgtggtgcagattctaaccatggtacaggaacttccatatgctgTAAGC
TCATCCTAAAGAGAAAGAATTTGAATCTTAACGAAACTGTAATAACATCTTAGCTTCATG
CCAACTTACCTTATAATACTTATCTTTCCCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-426, gnl|bosTau2|chr2 (1232126-1232539)
               

               
               1-426, gnl|Hg17|chr2 (127798032-127797593)
               

               
               1-426, gnl|Mm7|chr18 (32601822-32602254)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-426, gnl|bosTau2|chr2 (1232126-1232539)
               

               
               1-426, gnl|Hg17|chr2 (127798032-127797593)
               

               
               1-426, gnl|Mm7|chr18 (32601822-32602254)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-426, gnl\|bosTau2\|chr2 (1232126-1232539)
	1-426, gnl\|Hg17\|chr2 (127798032-127797593)
	1-426, gnl\|Mm7\|chr18 (32601822-32602254)