Non-Coding RNA Search

rpigcb_11526.y1

Sequence:


               
               CATGAATATTTCTTCAAAGAATGAATGTTATTTATCTTAAGTAATAGTGTACTTTTATTC
TTTATTTTTATTGCAATTCTTAGGTATTGCATATATGTAAAATTATTTTTATCTAAATGT
GTACTTTTTTCATTAAAATAAATTGGTTATCAGCTTTCAAAGACTTTTTTTATGTGCAAG
AATAAGAAAATGGGCAGACCAATGTTCCTTTGAAGATAATTGAAAATTTAGGAGAAAACT
AGAGGTATTTGAACTCTGAAAATCACAAAATGTTTTCTTACAAGTTCGTGTTTTGTACGT
CACTAATCATAAGTGATATATTTAATTTGTATGTGATAGAATGCACTTGCTATAATAGGT
CTCAGAGAGATAATAAAAAAGGGAAGTGATTGCCCTTTTTGAGAAAATGTCATGTCCAAG
GAATTCTGCTTAAGTGGAGTAAAGATTTCCACTTACATTTTGTTATGGCCCAGGGTCTGG
TATGCAATTATGATATCATGCTCATTTTACTCTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGAATATTTCTTCAAAGAATGAATGTTATTTATCTTAAGTAATAGTGTACTTTTATTC
TTTATTTTTATTGCAATTCTTAGGTATTGCATATATGTAAAATTATTTTTATCTAAATGT
GTACTTTTTTCATTAAAATAAATTGGTTATCAGCTTTCAAAGACTTTTTTTATGTGCAAG
AATAAGAAAATGGGCAGACCAATGTTCCTTTGAAGATAATTGAAAATTTAGGAGAAAACT
AGAGGTATTTGAACTCTGAAAATCACAAAATGTTTTCTTACAAGTTCGTGTTTTGTACGT
CACTAATCATAAGTGATATATTTAATTTGTATGTGATAGAATGCACTTGCTATAATAGGT
CTCAGAGAGATAATAAAAAAGGGAAGTGATTGCCCTTTTTGAGAAAATGTCATGTCCAAG
GAATTCTGCTTAAGTGGAGTAAAGATTTCCACTTACATTTTGTTATGGCCCAGGGTCTGG
TATGCAATTATGATATCATGCTCATTTTACTCTTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-517, gnl|bosTau2|chr1 (63999486-64000015)
               

               
               1-517, gnl|Hg17|chr3 (170300271-170299756)
               

               
               1-517, gnl|Mm7|chr3 (29767291-29766624)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-517, gnl|bosTau2|chr1 (63999486-64000015)
               

               
               1-517, gnl|Hg17|chr3 (170300271-170299756)
               

               
               1-517, gnl|Mm7|chr3 (29767291-29766624)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-517, gnl\|bosTau2\|chr1 (63999486-64000015)
	1-517, gnl\|Hg17\|chr3 (170300271-170299756)
	1-517, gnl\|Mm7\|chr3 (29767291-29766624)