Non-Coding RNA Search

rpigcb_11536.y1

Sequence:


               
               AAGAGGCTGTGATAGGTTCTAAAAAAACTGATTGAGTACCTCAAAAGCTGTCATAGAGCC
TGAGATTAAACAGATTCATCTTTCTTTCTTGGAAGTGAGGGAAGGTGGGGGTGGAGCGAA
TAGAAGAAGGCTTCCGTCTCTTTGTTGTCACTTTGCTTCTCCCACTCTCCTATTCCGAAT
CTGAGTGGTGGCTTGTACAGAGGGTCAGGAGCCTGACTGAGATGTCACAAGGACACGGTT
GTGGTTAGCAGTCCCTGTTGCGTGCGGGCTGCCAGCTGCACAGTGATGGGAGATTAAGAA
AAATTGGGATACAACTCTGACAGGCCTGACACAATTTATTTGGAAAATTTCAGCAGAGAA
CATGAGTAATAAAGACAAGAACAGTGACAGTAAGGAACAAATGTGAATTTCTGTCAGAGA
CGAAACAGAATTTTAAAAGAAGTAGGTTTGTTTGTTGTCTGCAGTCAAGTTTTGCACTTA
AACTGTGTTCCTAAATTGAAAGTCTTACCATTACTTTTCTGCTATTGACTAGGAAAGTAC
AATTAGAAGACTTTCTCTCTTCAGAGAATTATATATTTTAAGAATCACTGTACTTGTTTC
TTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAGGCTGTGATAGGTTCTAAAAAAACTGATTGAGTACCTCAAAAGCTGTCATAGAGCC
TGAGATTAAACAGATTCATCTTTCTTTCTTGGAAGTGAGGGAAGGTGGGGGTGGAGCGAA
TAGAAGAAGGCTTCCGTCTCTTTGTTGTCACTTTGCTTCTCCCACTCTCCTATTCCGAAT
CTGAGTGGTGGCTTGTACAGAGGGTCAGGAGCCTGACTGAGATGTCACAAGGACACGGTT
GTGGTTAGCAGTCCCTGTTGCGTGCGGGCTGCCAGCTGCACAGTGATGGGAGATTAAGAA
AAATTGGGATACAACTCTGACAGGCCTGACACAATTTATTTGGAAAATTTCAGCAGAGAA
CATGAGTAATAAAGACAAGAACAGTGACAGTAAGGAACAAATGTGAATTTCTGTCAGAGA
CGAAACAGAATTTTAAAAGAAGTAGGTTTGTTTGTTGTCTGCAGTCAAGTTTTGCACTTA
AACTGTGTTCCTAAATTGAAAGTCTTACCATTACTTTTCTGCTATTGACTAGGAAAGTAC
AATTAGAAGACTTTCTCTCTTCAGAGAATTATATATTTTAAGAATCACTGTACTTGTTTC
TTTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-605, gnl|bosTau2|chr23 (11688657-11688044)
               

               
               1-605, gnl|Hg17|chr6 (38186391-38187769)
               

               
               1-605, gnl|Mm7|chr17 (28379248-28379823)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-605, gnl|bosTau2|chr23 (11688657-11688044)
               

               
               1-605, gnl|Hg17|chr6 (38186391-38187769)
               

               
               1-605, gnl|Mm7|chr17 (28379248-28379823)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-605, gnl\|bosTau2\|chr23 (11688657-11688044)
	1-605, gnl\|Hg17\|chr6 (38186391-38187769)
	1-605, gnl\|Mm7\|chr17 (28379248-28379823)