Non-Coding RNA Search

rpigcb_11744.y1

Sequence:


               
               AGCAGTGTTTAAGTGTTCTGGGTTGGTGCTTAAAATAGTATATAATTCTCAATATTGTAT
ATTTTTTAATTCTGTTCATCTCTACATCCTTCCTGGGGTTCCAGTTCTTCCACATATTAG
AGTCTTCAAATTTCCCTATACCGTCCTTCTTCAGAATTCAAGTTGGGTGATCATCTGACT
TGCCTTCTAAAATACAAGCTGATAGAAACCCACGCTCATGCTGATTTAAGACAGTGGGAG
CCCTCCATGTAGAGAAACTTAATCATACTCATGATAGATTAAAAAGATGTCAGCTGAAGG
CTAGTTAATAAGAGAGTTAGTTATTACTCTGGTAACATCAGAGTAGGAAGACATTAATTT
GTGTCTCTCCTCCTGGGTTTTATAATCTTTGAAGAATAACCCATTTTTTTGGAACTCTGG
TATTATAGACATGTTTATTTTGTCATCAGTAATAGTGATTCGTTTTAACTGTTTGTTTCT
CACTGTTTTGTTCTACTTAGAAGAAGACACGGTAGGATTGTGAGTTTTTATCTAACTTTG
GACCCAGTGAGATGACCAGTGTGTTCCAGTTAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGTGTTTAAGTGTTCTGGGTTGGTGCTTAAAATAGTATATAATTCTCAATATTGTAT
ATTTTTTAATTCTGTTCATCTCTACATCCTTCCTGGGGTTCCAGTTCTTCCACATATTAG
AGTCTTCAAATTTCCCTATACCGTCCTTCTTCAGAATTCAAGTTGGGTGATCATCTGACT
TGCCTTCTAAAATACAAGCTGATAGAAACCCACGCTCATGCTGATTTAAGACAGTGGGAG
CCCTCCATGTAGAGAAACTTAATCATACTCATGATAGATTAAAAAGATGTCAGCTGAAGG
CTAGTTAATAAGAGAGTTAGTTATTACTCTGGTAACATCAGAGTAGGAAGACATTAATTT
GTGTCTCTCCTCCTGGGTTTTATAATCTTTGAAGAATAACCCATTTTTTTGGAACTCTGG
TATTATAGACATGTTTATTTTGTCATCAGTAATAGTGATTCGTTTTAACTGTTTGTTTCT
CACTGTTTTGTTCTACTTAGAAGAAGACACGGTAGGATTGTGAGTTTTTATCTAACTTTG
GACCCAGTGAGATGACCAGTGTGTTCCAGTTAAAGA

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-210, gnl|bosTau2|chrX (10780414-10780206)
               

               
               1-210, gnl|Hg17|chrX (146734982-146735193)
               

               
               1-210, gnl|Mm7|chrX (64108971-64109169)
               


               
               227-576, gnl|bosTau2|chrX (10780118-10779769)
               

               
               227-576, gnl|Hg17|chrX (146735215-146735554)
               

               
               227-576, gnl|Mm7|chrX (64109440-64109835)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-210, gnl|bosTau2|chrX (10780414-10780206)
               

               
               1-210, gnl|Hg17|chrX (146734982-146735193)
               

               
               1-210, gnl|Mm7|chrX (64108971-64109169)
               


               
               227-576, gnl|bosTau2|chrX (10780118-10779769)
               

               
               227-576, gnl|Hg17|chrX (146735215-146735554)
               

               
               227-576, gnl|Mm7|chrX (64109440-64109835)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-210, gnl\|bosTau2\|chrX (10780414-10780206)
	1-210, gnl\|Hg17\|chrX (146734982-146735193)
	1-210, gnl\|Mm7\|chrX (64108971-64109169)

	227-576, gnl\|bosTau2\|chrX (10780118-10779769)
	227-576, gnl\|Hg17\|chrX (146735215-146735554)
	227-576, gnl\|Mm7\|chrX (64109440-64109835)