Non-Coding RNA Search

rpigcb_11866.y1

Sequence:


               
               GCCACTACTTATTTTTGCTTTTGGTATCAGATTCAAAAAGTCATCACCAAGACTGTGTCA
AGAAGCTTACCATCTATGTTTTCTTCTAAAAGttctgggagttttatggtattagttctt
acatttcaagcctttaatccattttgaattcaatttcgtgtatggtataaggtaatggtc
cagtgtcattcttttgcatgtagctgtccagttttctcagcaccttttatcgaagagact
gtcctttccccgttgtacattcttgcctcctttgttgtaaattaattgaccatacatgca
taggtttatttTTTGGCCCATTGATCTGTATACCCCTTCTTATGCCCGTAACATAAGGGT
TAATCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCACTACTTATTTTTGCTTTTGGTATCAGATTCAAAAAGTCATCACCAAGACTGTGTCA
AGAAGCTTACCATCTATGTTTTCTTCTAAAAGttctgggagttttatggtattagttctt
acatttcaagcctttaatccattttgaattcaatttcgtgtatggtataaggtaatggtc
cagtgtcattcttttgcatgtagctgtccagttttctcagcaccttttatcgaagagact
gtcctttccccgttgtacattcttgcctcctttgttgtaaattaattgaccatacatgca
taggtttatttTTTGGCCCATTGATCTGTATACCCCTTCTTATGCCCGTAACATAAGGGT
TAATCTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               13-329, gnl|bosTau2|chr17 (10843424-10843125)
               


               
               16-311, gnl|bosTau2|chr14 (38226063-38226343)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-329, gnl|bosTau2|chr17 (10843424-10843125)
               


               
               16-311, gnl|bosTau2|chr14 (38226063-38226343)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	13-329, gnl\|bosTau2\|chr17 (10843424-10843125)

	16-311, gnl\|bosTau2\|chr14 (38226063-38226343)