Non-Coding RNA Search

rpigcb_12566.y1

Sequence:


               
               AAGCGCGGACTGGTCATGGGGAGCGGGGGTCCCCCGTGCTGTCCGGTCCGAGGCCGGGAT
CTTCTCCAGGTCCCCGAACTGCCCCCGGCTTTGCCACCTCCGACGGAAAGTTTGGGGCGG
GCTTGGACGGAGGCCGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCGCGGACTGGTCATGGGGAGCGGGGGTCCCCCGTGCTGTCCGGTCCGAGGCCGGGAT
CTTCTCCAGGTCCCCGAACTGCCCCCGGCTTTGCCACCTCCGACGGAAAGTTTGGGGCGG
GCTTGGACGGAGGCCGATG

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               18-139, gnl|bosTau2|chr11 (3440161-3440282)
               

               
               18-139, gnl|canFam2|chr10 (48234560-48234343)
               

               
               18-139, gnl|hg17|chr2 (96956978-96957208)
               

               
               18-139, gnl|Hg17|chr2 (96957240-96957124)
               

               
               18-139, gnl|mm7|chr1 (36798904-36799111)
               

               
               18-139, gnl|Mm7|chr1 (36799149-36799028)
               

               
               18-139, gnl|monDom2|scaffold_1 (154506648-154506974)
               

               
               18-139, gnl|panTro1|chr12 (99977889-99978119)
               

               
               18-139, gnl|rn3|chr9 (35503198-35503405)
               

               
               18-139, gnl|xenTro1|scaffold_5790 (10546-10315)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-139, gnl|bosTau2|chr11 (3440161-3440282)
               

               
               18-139, gnl|canFam2|chr10 (48234560-48234343)
               

               
               18-139, gnl|hg17|chr2 (96956978-96957208)
               

               
               18-139, gnl|Hg17|chr2 (96957240-96957124)
               

               
               18-139, gnl|mm7|chr1 (36798904-36799111)
               

               
               18-139, gnl|Mm7|chr1 (36799149-36799028)
               

               
               18-139, gnl|monDom2|scaffold_1 (154506648-154506974)
               

               
               18-139, gnl|panTro1|chr12 (99977889-99978119)
               

               
               18-139, gnl|rn3|chr9 (35503198-35503405)
               

               
               18-139, gnl|xenTro1|scaffold_5790 (10546-10315)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	18-139, gnl\|bosTau2\|chr11 (3440161-3440282)
	18-139, gnl\|canFam2\|chr10 (48234560-48234343)
	18-139, gnl\|hg17\|chr2 (96956978-96957208)
	18-139, gnl\|Hg17\|chr2 (96957240-96957124)
	18-139, gnl\|mm7\|chr1 (36798904-36799111)
	18-139, gnl\|Mm7\|chr1 (36799149-36799028)
	18-139, gnl\|monDom2\|scaffold_1 (154506648-154506974)
	18-139, gnl\|panTro1\|chr12 (99977889-99978119)
	18-139, gnl\|rn3\|chr9 (35503198-35503405)
	18-139, gnl\|xenTro1\|scaffold_5790 (10546-10315)