rpigcb_12589.y1
|
TTGCACCAAAGATTTGATATTTCCTGGTCTAGAGAAGTATGATTGAGTGTTTGACATGAG
GTTATCAATGTGAGTATGGAACTTTGAAGACAAAGTGGAGTTCCTTTCAAATGACAGGAC
CTGGTTGACCTTAGATCAAGCAAACATTTGGTATAGGAAGCTAGGGGAAGGAAGGGGAGG
ACCAAGAATAGAGACAGACAGAAGGTTACTTAGGACAGACTTTCTTTTTTTAAGTCTAAA
GTGGTCCTGATCCCGAAAAAGAAAGTCATAGACAGTAAGAAATATCCTACAGTTTCAGGG
ATTAATTAACTCCTGGCATAGACCTGATAAACCAGCTCAGATCAAAGATCAGATAAAGAT
TCTTTTTCTATTCCCAGTAGATGCTAATTCAAAAGCATTAGGCAGGATAGAAAATAATCT
CTCCCCCAAGAAAATAGGAATGGGCCATCATACCTATAGATCAGCATCTGTCAAAAGATT
ACTGTGAGAAATGACCACTTATGCAATCTCTGTAACCTCCCATCAAGCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TTGCACCAAAGATTTGATATTTCCTGGTCTAGAGAAGTATGATTGAGTGTTTGACATGAG
GTTATCAATGTGAGTATGGAACTTTGAAGACAAAGTGGAGTTCCTTTCAAATGACAGGAC
CTGGTTGACCTTAGATCAAGCAAACATTTGGTATAGGAAGCTAGGGGAAGGAAGGGGAGG
ACCAAGAATAGAGACAGACAGAAGGTTACTTAGGACAGACTTTCTTTTTTTAAGTCTAAA
GTGGTCCTGATCCCGAAAAAGAAAGTCATAGACAGTAAGAAATATCCTACAGTTTCAGGG
ATTAATTAACTCCTGGCATAGACCTGATAAACCAGCTCAGATCAAAGATCAGATAAAGAT
TCTTTTTCTATTCCCAGTAGATGCTAATTCAAAAGCATTAGGCAGGATAGAAAATAATCT
CTCCCCCAAGAAAATAGGAATGGGCCATCATACCTATAGATCAGCATCTGTCAAAAGATT
ACTGTGAGAAATGACCACTTATGCAATCTCTGTAACCTCCCATCAAGCC
|
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6-307, gnl|bosTau2|chr8 (17178791-17178501) |
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6-307, gnl|Hg17|chr9 (2625684-2625976) |
| |
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324-529, gnl|bosTau2|chr8 (17178237-17178026) |
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324-529, gnl|canFam2|chr1 (94321382-94321597) |
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324-529, gnl|hg17|chr9 (2626002-2626244) |
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324-529, gnl|Hg17|chr9 (2626001-2626208) |
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324-529, gnl|loxAfr1|scaffold_32385 (749-988) |
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324-529, gnl|mm7|chr19 (26931050-26931297) |
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324-529, gnl|Mm7|chr19 (26931066-26931263) |
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324-529, gnl|oryCun1|scaffold_199452 (2799-2509) |
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324-529, gnl|panTro1|chr11 (2588325-2588567) |
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324-529, gnl|rheMac2|chr15 (74605295-74605053) |
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324-529, gnl|rn3|chr1 (230843960-230844197) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-307, gnl|bosTau2|chr8 (17178791-17178501) |
|
6-307, gnl|Hg17|chr9 (2625684-2625976) |
| |
|
324-529, gnl|bosTau2|chr8 (17178237-17178026) |
|
324-529, gnl|canFam2|chr1 (94321382-94321597) |
|
324-529, gnl|hg17|chr9 (2626002-2626244) |
|
324-529, gnl|Hg17|chr9 (2626001-2626208) |
|
324-529, gnl|loxAfr1|scaffold_32385 (749-988) |
|
324-529, gnl|mm7|chr19 (26931050-26931297) |
|
324-529, gnl|Mm7|chr19 (26931066-26931263) |
|
324-529, gnl|oryCun1|scaffold_199452 (2799-2509) |
|
324-529, gnl|panTro1|chr11 (2588325-2588567) |
|
324-529, gnl|rheMac2|chr15 (74605295-74605053) |
|
324-529, gnl|rn3|chr1 (230843960-230844197) |
