rpigcb_12921.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCAAAAAATGGAACAGGCAAGAGCGGTGCCTACCTCATTCCCTTACTTGAACGGCTAGA CCTGAAGAAGGACAATATACAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTGCA GGTCAGTCAAATTTGCATCCAGGTCAGCAAACACATGGGAGGGGCCAAAGTGATGGCAAC CACAGGAGGAACCAATTTACGAGATGACATAATGAGGCTTGATGATACAGTGCATGTGGT GATAGCTACCCCTGGGAGAATTCTGGATCTTATCAAGAAAGGAGTAGCAAAAGTTGATCA TGTCCAGATGATAGTATTGGATGAGGCGGATAAGTTGCTGTCACAGGATTTTGTGCAGAT AATGGAGGATATTATTCTCACGCTACCTAAAAACAGACAGATTTTATTATATTCCGCTAC TTTCCCTCTTAGTGTACAGAAGTTCATGAATTCCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCAAAAAATGGAACAGGCAAGAGCGGTGCCTACCTCATTCCCTTACTTGAACGGCTAGA CCTGAAGAAGGACAATATACAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTGCA GGTCAGTCAAATTTGCATCCAGGTCAGCAAACACATGGGAGGGGCCAAAGTGATGGCAAC CACAGGAGGAACCAATTTACGAGATGACATAATGAGGCTTGATGATACAGTGCATGTGGT GATAGCTACCCCTGGGAGAATTCTGGATCTTATCAAGAAAGGAGTAGCAAAAGTTGATCA TGTCCAGATGATAGTATTGGATGAGGCGGATAAGTTGCTGTCACAGGATTTTGTGCAGAT AATGGAGGATATTATTCTCACGCTACCTAAAAACAGACAGATTTTATTATATTCCGCTAC TTTCCCTCTTAGTGTACAGAAGTTCATGAATTCCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 75-243, gnl|bosTau2|chr15 (14838003-14838170) | |
| 75-243, gnl|Hg17|chr11 (118141283-118141115) | |
| 75-243, gnl|Mm7|chr9 (44558811-44558977) | |
| 324-448, gnl|bosTau2|chr15 (14841319-14841443) | |
| 324-448, gnl|canFam2|chr3 (63015225-63015347) | |
| 324-448, gnl|canFam2|chr5 (18028843-18028663) | |
| 324-448, gnl|danRer3|chr3 (36599227-36599455) | |
| 324-448, gnl|danRer3|chr3 (36599472-36599301) | |
| 324-448, gnl|dasNov1|scaffold_1747 (34842-34717) | |
| 324-448, gnl|dasNov1|scaffold_1747 (34696-34876) | |
| 324-448, gnl|echTel1|scaffold_224640 (3143-3019) | |
| 324-448, gnl|echTel1|scaffold_224640 (2995-3177) | |
| 324-448, gnl|fr1|chrUn (66097302-66097497) | |
| 324-448, gnl|fr1|chrUn (66097521-66097373) | |
| 324-448, gnl|galGal2|chr24 (5231317-5231224) | |
| 324-448, gnl|galGal2|chr24 (5231538-5231716) | |
| 324-448, gnl|hg17|chr11 (118135819-118136001) | |
| 324-448, gnl|Hg17|chr11 (118135965-118135841) | |
| 324-448, gnl|hg17|chr13 (85726816-85726941) | |
| 324-448, gnl|loxAfr1|scaffold_37266 (12913-12789) | |
| 324-448, gnl|loxAfr1|scaffold_37266 (12765-12947) | |
| 324-448, gnl|mm7|chr2 (24186945-24187068) | |
| 324-448, gnl|mm7|chr9 (44562130-44561948) | |
| 324-448, gnl|Mm7|chr9 (44561981-44562105) | |
| 324-448, gnl|monDom2|scaffold_2 (119940044-119940168) | |
| 324-448, gnl|monDom2|scaffold_2 (119940194-119940007) | |
| 324-448, gnl|oryCun1|scaffold_127497 (5159-5035) | |
| 324-448, gnl|oryCun1|scaffold_127497 (5021-5185) | |
| 324-448, gnl|panTro1|chr14 (68469240-68469365) | |
| 324-448, gnl|panTro1|chr9 (120152538-120152720) | |
| 324-448, gnl|rheMac2|chr14 (117156736-117156918) | |
| 324-448, gnl|rheMac2|chr17 (66701581-66701707) | |
| 324-448, gnl|rn3|chr1 (62086513-62086391) | |
| 324-448, gnl|rn3|chr8 (47603541-47603368) | |
| 324-448, gnl|tetNig1|chr16 (5266617-5266815) | |
| 324-448, gnl|tetNig1|chr16 (5266824-5266672) | |
| 324-448, gnl|xenTro1|scaffold_18 (63259-63134) | |
| 324-448, gnl|xenTro1|scaffold_18 (63089-63292) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 75-243, gnl|bosTau2|chr15 (14838003-14838170) | |
| 75-243, gnl|Hg17|chr11 (118141283-118141115) | |
| 75-243, gnl|Mm7|chr9 (44558811-44558977) | |
| 324-448, gnl|bosTau2|chr15 (14841319-14841443) | |
| 324-448, gnl|canFam2|chr3 (63015225-63015347) | |
| 324-448, gnl|canFam2|chr5 (18028843-18028663) | |
| 324-448, gnl|danRer3|chr3 (36599227-36599455) | |
| 324-448, gnl|danRer3|chr3 (36599472-36599301) | |
| 324-448, gnl|dasNov1|scaffold_1747 (34842-34717) | |
| 324-448, gnl|dasNov1|scaffold_1747 (34696-34876) | |
| 324-448, gnl|echTel1|scaffold_224640 (3143-3019) | |
| 324-448, gnl|echTel1|scaffold_224640 (2995-3177) | |
| 324-448, gnl|fr1|chrUn (66097302-66097497) | |
| 324-448, gnl|fr1|chrUn (66097521-66097373) | |
| 324-448, gnl|galGal2|chr24 (5231317-5231224) | |
| 324-448, gnl|galGal2|chr24 (5231538-5231716) | |
| 324-448, gnl|hg17|chr11 (118135819-118136001) | |
| 324-448, gnl|Hg17|chr11 (118135965-118135841) | |
| 324-448, gnl|hg17|chr13 (85726816-85726941) | |
| 324-448, gnl|loxAfr1|scaffold_37266 (12913-12789) | |
| 324-448, gnl|loxAfr1|scaffold_37266 (12765-12947) | |
| 324-448, gnl|mm7|chr2 (24186945-24187068) | |
| 324-448, gnl|mm7|chr9 (44562130-44561948) | |
| 324-448, gnl|Mm7|chr9 (44561981-44562105) | |
| 324-448, gnl|monDom2|scaffold_2 (119940044-119940168) | |
| 324-448, gnl|monDom2|scaffold_2 (119940194-119940007) | |
| 324-448, gnl|oryCun1|scaffold_127497 (5159-5035) | |
| 324-448, gnl|oryCun1|scaffold_127497 (5021-5185) | |
| 324-448, gnl|panTro1|chr14 (68469240-68469365) | |
| 324-448, gnl|panTro1|chr9 (120152538-120152720) | |
| 324-448, gnl|rheMac2|chr14 (117156736-117156918) | |
| 324-448, gnl|rheMac2|chr17 (66701581-66701707) | |
| 324-448, gnl|rn3|chr1 (62086513-62086391) | |
| 324-448, gnl|rn3|chr8 (47603541-47603368) | |
| 324-448, gnl|tetNig1|chr16 (5266617-5266815) | |
| 324-448, gnl|tetNig1|chr16 (5266824-5266672) | |
| 324-448, gnl|xenTro1|scaffold_18 (63259-63134) | |
| 324-448, gnl|xenTro1|scaffold_18 (63089-63292) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |