Non-Coding RNA Search

rpigcb_14025.y1

Sequence:


               
               CCCCCCTCCCttttttttttttttttttttttttttttttttttgtctttttagggccac
accaagggcatatggcatatttgaccccaggctaggggtcgaatcagagctgtagccact
ggcctacaccacagccacagcaaggccagggatcaaacctgtgtcctcatggatgttagt
cagattcgtctctgctgagccacaatgggaactccGGGATTTGATCTTTTTAAGCTTCAC
CTCAACAATACTCTGGTCCTCTGCCAGTGCTAAGGTGGAAGCACACTGTTTCCTGAACAT
CCAGGAAAAAGGTCTGGGAAAGGAGCTCCCCTGTCATTCAAAGTGTATACCAACCTTTCT
GCATCCATCTGATTGGCAAAAATGGCAGTGTAACAAGTGTGGAGCAACCAGGACTTTCAT
ATGCAACTAGTGGGAATATTAACAGATGCAACCACTTTGGAGAGCAATCCAGCCAACATC
CAGTAAAACCGAGATATCCGTACCCTTCAAGACAACAATTCTACTTGGAAACATATGCGT
CTACGGAAACGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCCCTCCCttttttttttttttttttttttttttttttttttgtctttttagggccac
accaagggcatatggcatatttgaccccaggctaggggtcgaatcagagctgtagccact
ggcctacaccacagccacagcaaggccagggatcaaacctgtgtcctcatggatgttagt
cagattcgtctctgctgagccacaatgggaactccGGGATTTGATCTTTTTAAGCTTCAC
CTCAACAATACTCTGGTCCTCTGCCAGTGCTAAGGTGGAAGCACACTGTTTCCTGAACAT
CCAGGAAAAAGGTCTGGGAAAGGAGCTCCCCTGTCATTCAAAGTGTATACCAACCTTTCT
GCATCCATCTGATTGGCAAAAATGGCAGTGTAACAAGTGTGGAGCAACCAGGACTTTCAT
ATGCAACTAGTGGGAATATTAACAGATGCAACCACTTTGGAGAGCAATCCAGCCAACATC
CAGTAAAACCGAGATATCCGTACCCTTCAAGACAACAATTCTACTTGGAAACATATGCGT
CTACGGAAACGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               218-383, gnl|bosTau2|chr3 (25267330-25267493)
               

               
               218-383, gnl|Hg17|chr1 (110434625-110434112)
               

               
               218-383, gnl|Mm7|chr3 (107306606-107306764)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               218-383, gnl|bosTau2|chr3 (25267330-25267493)
               

               
               218-383, gnl|Hg17|chr1 (110434625-110434112)
               

               
               218-383, gnl|Mm7|chr3 (107306606-107306764)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	218-383, gnl\|bosTau2\|chr3 (25267330-25267493)
	218-383, gnl\|Hg17\|chr1 (110434625-110434112)
	218-383, gnl\|Mm7\|chr3 (107306606-107306764)