Non-Coding RNA Search

rpigcb_14512.y1

Sequence:


               
               TATCACCAATATATGTAGTCTTTGATGGGTTCTCCCATCTTTCAAATTAACTAAGAGCAT
CAAAGATTCTAGTTCATTGACAAATTTTTGAAACAGTCGAACATTTTCAATATTTCTAGG
CTGGTCCCAAATCTTTCAGCATCTAGGAAGTTGTAGGCAAAGTAATGAAAAAGATAGATT
GTCCCTCTTTAGATATAATACCATTAAGGTGGCATTGGGTGAGGTAAGAATATCCCCTCT
TTGTAGAAGATAGTAAATGTACATCTTGATTTTTTTAATTATACAAGGGCGTTAAATGAA
ATTAGAAGAACATGAAAATATAAGAAAAGAATGTAGGGAGAAAAATTTCCCTGGTGACCT
CACGTAAATTGTTCAACATTTTATTTTTATCCTGCCAGTGTTTTGTGTATATAGATTTGT
TTATATGGATTTGTACTGTATATACTCTTTTGTTTCCTGCTTTCACCCTTAAAATGTCGT
GACTATTTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCACCAATATATGTAGTCTTTGATGGGTTCTCCCATCTTTCAAATTAACTAAGAGCAT
CAAAGATTCTAGTTCATTGACAAATTTTTGAAACAGTCGAACATTTTCAATATTTCTAGG
CTGGTCCCAAATCTTTCAGCATCTAGGAAGTTGTAGGCAAAGTAATGAAAAAGATAGATT
GTCCCTCTTTAGATATAATACCATTAAGGTGGCATTGGGTGAGGTAAGAATATCCCCTCT
TTGTAGAAGATAGTAAATGTACATCTTGATTTTTTTAATTATACAAGGGCGTTAAATGAA
ATTAGAAGAACATGAAAATATAAGAAAAGAATGTAGGGAGAAAAATTTCCCTGGTGACCT
CACGTAAATTGTTCAACATTTTATTTTTATCCTGCCAGTGTTTTGTGTATATAGATTTGT
TTATATGGATTTGTACTGTATATACTCTTTTGTTTCCTGCTTTCACCCTTAAAATGTCGT
GACTATTTCTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-488, gnl|bosTau2|chr22 (24464460-24464931)
               

               
               5-488, gnl|Hg17|chr3 (71420304-71418926)
               

               
               5-488, gnl|Mm7|chr6 (99337863-99337385)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-488, gnl|bosTau2|chr22 (24464460-24464931)
               

               
               5-488, gnl|Hg17|chr3 (71420304-71418926)
               

               
               5-488, gnl|Mm7|chr6 (99337863-99337385)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	5-488, gnl\|bosTau2\|chr22 (24464460-24464931)
	5-488, gnl\|Hg17\|chr3 (71420304-71418926)
	5-488, gnl\|Mm7\|chr6 (99337863-99337385)