Non-Coding RNA Search

rpigcb_14601.y1

Sequence:


               
               ACCACGTGAACAGCAAGATCCCATGGTCAAGGAGACTGGTGTTCAGACTCGCCACGCACC
TGGGGCCATAACCTGAGCTTGCCCTTGGGCCTCCCTTTCTGCCAGGAGCTGTTGGCATGG
AGAGGAGCCCAGCTTCATGTGCCCTGTCGCCCTGGTAAGTTGGCTGGACCCACAGAATCC
CAGGTCCCTGTAAAACAAGGAGCTGGTATATGCCGTGTGGTTTTCGGGCCTCTGGTGGAG
GAGGTTTCGCTTTAGAGAGCTGGACCGTCACCCTCCTGGGCGTGCCGAGGAGGCTGTATT
TGGGGTGGGAGCCTCCTGCTTCGTTCACGGCTGGTGAATGCCTCTTTGCTCCCTCTTTCT
AGTGAATGTCCTAAAGGCAATTAATAAGGATTCCAGGAAATGAAAGAGTAGTTTCATGTT
TGTTCTTCTTTTTAATGGCCAAATTCAGGCAAAGAACATTTTAGACAGCATTTAAAGTCA
CGACTCTAGATAGAAATTTCCTTGGTCAGCCCAACCTCCTCCTCTCTTTTTAAAAAAGGA
CATCATATTTTAATCTGCCAGGAACAGAATGCTCCAAAACAAAGATCCTCCTCAGAGCCA
AGTTGCTGTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCACGTGAACAGCAAGATCCCATGGTCAAGGAGACTGGTGTTCAGACTCGCCACGCACC
TGGGGCCATAACCTGAGCTTGCCCTTGGGCCTCCCTTTCTGCCAGGAGCTGTTGGCATGG
AGAGGAGCCCAGCTTCATGTGCCCTGTCGCCCTGGTAAGTTGGCTGGACCCACAGAATCC
CAGGTCCCTGTAAAACAAGGAGCTGGTATATGCCGTGTGGTTTTCGGGCCTCTGGTGGAG
GAGGTTTCGCTTTAGAGAGCTGGACCGTCACCCTCCTGGGCGTGCCGAGGAGGCTGTATT
TGGGGTGGGAGCCTCCTGCTTCGTTCACGGCTGGTGAATGCCTCTTTGCTCCCTCTTTCT
AGTGAATGTCCTAAAGGCAATTAATAAGGATTCCAGGAAATGAAAGAGTAGTTTCATGTT
TGTTCTTCTTTTTAATGGCCAAATTCAGGCAAAGAACATTTTAGACAGCATTTAAAGTCA
CGACTCTAGATAGAAATTTCCTTGGTCAGCCCAACCTCCTCCTCTCTTTTTAAAAAAGGA
CATCATATTTTAATCTGCCAGGAACAGAATGCTCCAAAACAAAGATCCTCCTCAGAGCCA
AGTTGCTGTCTCC

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               60-316, gnl|bosTau2|chr11 (3355908-3355656)
               

               
               60-316, gnl|Hg17|chr2 (97040047-97040337)
               


               
               331-612, gnl|bosTau2|chr11 (3355556-3355273)
               

               
               331-612, gnl|Hg17|chr2 (97040352-97040648)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-316, gnl|bosTau2|chr11 (3355908-3355656)
               

               
               60-316, gnl|Hg17|chr2 (97040047-97040337)
               


               
               331-612, gnl|bosTau2|chr11 (3355556-3355273)
               

               
               331-612, gnl|Hg17|chr2 (97040352-97040648)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	60-316, gnl\|bosTau2\|chr11 (3355908-3355656)
	60-316, gnl\|Hg17\|chr2 (97040047-97040337)

	331-612, gnl\|bosTau2\|chr11 (3355556-3355273)
	331-612, gnl\|Hg17\|chr2 (97040352-97040648)