Non-Coding RNA Search

rpigcb_14627.y1

Sequence:


               
               CCCAAATCAATAACCACTGTGATGCACTGCCAGCCCAGATCAGCATTTTCCTCGCACTAA
AGCCCAGCTCTGAAGCGCTGTGGAACCTCGTTGTTTTGACATTGGGCTTTGAGATAACAT
GGCAGTCCTAATTATTGATATTATTTTCCTCTGGATTTCCGAAAACATGCTATTGTTTAC
CAGAAAGATTCTGTGTTTACATGGGGTTTTTTCTTCTGGAGATTGCTAGGAAATTACTCC
ATCTAATTTCCTAGGGTTTAGCCACTGTCTTCTTTATTAACACCTAACCGATTTGAGATT
AATGAGAAAATACACACACACACACACATACACAAATTTTCCTCGTGGAGAATACAGTTT
CCCGGATAGCTAGCCCTCTAAAATGCTCATATCCTGCTTAAGTGATAGTGTATTTAGTAG
TTTAAAATAAAAATCATTACTGCTTATGATCTAGTTAATATACTTATCCCGTCACTAGAA
CTGATCTAGTAAATGGACTTTTGTCGTAAAGAACCAAGTTTGGAAGCAGAGCATCTGCCT
ACAGAGAAGATTCTTGTGGCTACAGATCTCTTTGAGAAAAAGTCTACCCCTTCCTTCCAG
AAACTTTACAGACCTGCAGCTCCTGGATGTCAGCTATCATGTAATAGTGACAATTCAGAC
TTCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAAATCAATAACCACTGTGATGCACTGCCAGCCCAGATCAGCATTTTCCTCGCACTAA
AGCCCAGCTCTGAAGCGCTGTGGAACCTCGTTGTTTTGACATTGGGCTTTGAGATAACAT
GGCAGTCCTAATTATTGATATTATTTTCCTCTGGATTTCCGAAAACATGCTATTGTTTAC
CAGAAAGATTCTGTGTTTACATGGGGTTTTTTCTTCTGGAGATTGCTAGGAAATTACTCC
ATCTAATTTCCTAGGGTTTAGCCACTGTCTTCTTTATTAACACCTAACCGATTTGAGATT
AATGAGAAAATACACACACACACACACATACACAAATTTTCCTCGTGGAGAATACAGTTT
CCCGGATAGCTAGCCCTCTAAAATGCTCATATCCTGCTTAAGTGATAGTGTATTTAGTAG
TTTAAAATAAAAATCATTACTGCTTATGATCTAGTTAATATACTTATCCCGTCACTAGAA
CTGATCTAGTAAATGGACTTTTGTCGTAAAGAACCAAGTTTGGAAGCAGAGCATCTGCCT
ACAGAGAAGATTCTTGTGGCTACAGATCTCTTTGAGAAAAAGTCTACCCCTTCCTTCCAG
AAACTTTACAGACCTGCAGCTCCTGGATGTCAGCTATCATGTAATAGTGACAATTCAGAC
TTCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-665, gnl|bosTau2|chr24 (42496593-42495917)
               

               
               4-665, gnl|Hg17|chr18 (52845756-52846415)
               

               
               4-665, gnl|Mm7|chr18 (64376083-64376658)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-665, gnl|bosTau2|chr24 (42496593-42495917)
               

               
               4-665, gnl|Hg17|chr18 (52845756-52846415)
               

               
               4-665, gnl|Mm7|chr18 (64376083-64376658)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	4-665, gnl\|bosTau2\|chr24 (42496593-42495917)
	4-665, gnl\|Hg17\|chr18 (52845756-52846415)
	4-665, gnl\|Mm7\|chr18 (64376083-64376658)