Non-Coding RNA Search

rpigcb_14757.y1

Sequence:


               
               GGCTTCCAAGAACATGATTGGAGAGGGGTTCAAAGGAATGATTTTGTTTTTCATTGACTA
TAACCATATTCTTTCATCTGCAATCAAATCTCAAGACTAAGGATGTTGTATTAAATCAAA
TCATTACAGGAAGTATGACTGTATCGGGACTTTTTACAAAAACAAACTTCCAGATCACCA
GAGGAAGCTGTGTTTGTGTGCTGACACAAAGTATTCAACAGCAGTCAGGAGATGAAGGCA
GGATGACAGCCAACTTGGATCTATTTTTGAAGAATTATTTCTGTAGGGTGTCATGGAAGT
TACAAAAAAGAATGCTTTGGTAAATAGTCATATCCATTCCAAAAAGACCCATTCCAAAAT
ACCACTTAATGAAATTCGCGGGGATGTTATGAAGATGAAAATCCCAAATGACATGCAGAT
TTTACAAGCAAACAGTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTTCCAAGAACATGATTGGAGAGGGGTTCAAAGGAATGATTTTGTTTTTCATTGACTA
TAACCATATTCTTTCATCTGCAATCAAATCTCAAGACTAAGGATGTTGTATTAAATCAAA
TCATTACAGGAAGTATGACTGTATCGGGACTTTTTACAAAAACAAACTTCCAGATCACCA
GAGGAAGCTGTGTTTGTGTGCTGACACAAAGTATTCAACAGCAGTCAGGAGATGAAGGCA
GGATGACAGCCAACTTGGATCTATTTTTGAAGAATTATTTCTGTAGGGTGTCATGGAAGT
TACAAAAAAGAATGCTTTGGTAAATAGTCATATCCATTCCAAAAAGACCCATTCCAAAAT
ACCACTTAATGAAATTCGCGGGGATGTTATGAAGATGAAAATCCCAAATGACATGCAGAT
TTTACAAGCAAACAGTCTT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               4-437, gnl|bosTau2|chr1 (97857802-97858253)
               

               
               4-437, gnl|canFam2|chr31 (35512049-35512511)
               

               
               4-437, gnl|dasNov1|scaffold_209 (70051-70491)
               

               
               4-437, gnl|echTel1|scaffold_287547 (55019-54548)
               

               
               4-437, gnl|hg17|chr21 (38600256-38600716)
               

               
               4-437, gnl|Hg17|chr21 (38600269-38600706)
               

               
               4-437, gnl|mm7|chr16 (95610630-95611085)
               

               
               4-437, gnl|oryCun1|scaffold_159924 (4481-4030)
               

               
               4-437, gnl|panTro1|chr22 (38642011-38642471)
               

               
               4-437, gnl|rheMac2|chr3 (8318485-8318025)
               

               
               4-437, gnl|rn3|chr11 (35657445-35657870)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-437, gnl|bosTau2|chr1 (97857802-97858253)
               

               
               4-437, gnl|canFam2|chr31 (35512049-35512511)
               

               
               4-437, gnl|dasNov1|scaffold_209 (70051-70491)
               

               
               4-437, gnl|echTel1|scaffold_287547 (55019-54548)
               

               
               4-437, gnl|hg17|chr21 (38600256-38600716)
               

               
               4-437, gnl|Hg17|chr21 (38600269-38600706)
               

               
               4-437, gnl|mm7|chr16 (95610630-95611085)
               

               
               4-437, gnl|oryCun1|scaffold_159924 (4481-4030)
               

               
               4-437, gnl|panTro1|chr22 (38642011-38642471)
               

               
               4-437, gnl|rheMac2|chr3 (8318485-8318025)
               

               
               4-437, gnl|rn3|chr11 (35657445-35657870)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	4-437, gnl\|bosTau2\|chr1 (97857802-97858253)
	4-437, gnl\|canFam2\|chr31 (35512049-35512511)
	4-437, gnl\|dasNov1\|scaffold_209 (70051-70491)
	4-437, gnl\|echTel1\|scaffold_287547 (55019-54548)
	4-437, gnl\|hg17\|chr21 (38600256-38600716)
	4-437, gnl\|Hg17\|chr21 (38600269-38600706)
	4-437, gnl\|mm7\|chr16 (95610630-95611085)
	4-437, gnl\|oryCun1\|scaffold_159924 (4481-4030)
	4-437, gnl\|panTro1\|chr22 (38642011-38642471)
	4-437, gnl\|rheMac2\|chr3 (8318485-8318025)
	4-437, gnl\|rn3\|chr11 (35657445-35657870)