Non-Coding RNA Search

rpigcb_14787.y1

Sequence:


               
               ACCAAGATATAATATTAAATTATTTATATGACCAGATATGGAAGTTACCTTGAGAACTTT
CAGACAGGAATTCCATGAGAAATACACCCTGATTTTTGCAATCCTAAAATATTTGCAGAG
TTTAAAGGAACAACTCAAGTTGTTGACTTTTGCTGCAAAACACACTGAGTCGCTGGTGAT
TCATTTGTGCCTGGCTAAACTTTTGGGTGTTTTGTCTTTTTTTTTTTTTAACTCTGGAAA
GCAAAATGAATTAAACATTTCTGAGTTTTCAAATTCATCAGTGGATTCACCCCAAATATT
TGAGCTGCTTCTTTGCTTTTGGAAACTACGACGCCTTGGAGATTCCAGCTGGAGACGCTT
CTGACAGAAAGAAATGTCTGCAAGCAGCTACAAAAATGCATGATGGCTTTGACTTAAGAG
GCATTGATACCGCTTGGCCTTTCTTTCAAAAAGGCCACCTTACAACTTGGCCTGAAGGCA
ttcccgtcgtggtgcagcggaaaacgaatctgactaggaaccccgaggttgtgggttcaa
tccctggccttgctcagtggcttaaggatcgggtgttgaagtaagctgtggtgta

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAAGATATAATATTAAATTATTTATATGACCAGATATGGAAGTTACCTTGAGAACTTT
CAGACAGGAATTCCATGAGAAATACACCCTGATTTTTGCAATCCTAAAATATTTGCAGAG
TTTAAAGGAACAACTCAAGTTGTTGACTTTTGCTGCAAAACACACTGAGTCGCTGGTGAT
TCATTTGTGCCTGGCTAAACTTTTGGGTGTTTTGTCTTTTTTTTTTTTTAACTCTGGAAA
GCAAAATGAATTAAACATTTCTGAGTTTTCAAATTCATCAGTGGATTCACCCCAAATATT
TGAGCTGCTTCTTTGCTTTTGGAAACTACGACGCCTTGGAGATTCCAGCTGGAGACGCTT
CTGACAGAAAGAAATGTCTGCAAGCAGCTACAAAAATGCATGATGGCTTTGACTTAAGAG
GCATTGATACCGCTTGGCCTTTCTTTCAAAAAGGCCACCTTACAACTTGGCCTGAAGGCA
ttcccgtcgtggtgcagcggaaaacgaatctgactaggaaccccgaggttgtgggttcaa
tccctggccttgctcagtggcttaaggatcgggtgttgaagtaagctgtggtgta

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-467, gnl|bosTau2|chr11 (72444184-72444649)
               

               
               11-467, gnl|Hg17|chr9 (121309389-121308916)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-467, gnl|bosTau2|chr11 (72444184-72444649)
               

               
               11-467, gnl|Hg17|chr9 (121309389-121308916)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	11-467, gnl\|bosTau2\|chr11 (72444184-72444649)
	11-467, gnl\|Hg17\|chr9 (121309389-121308916)