Non-Coding RNA Search

rpigcb_14823.y1

Sequence:


               
               CTTCAAATAAGGAAGCTTTTCATACAGCATGAAAGATAAAAAAAAAAAAGTTCTTCAAAG
AATGAGGATTTAGAAAATATCAACTATTATGTCTCTGATAATTAGTAAATCATGATATAA
TGAGATCAATATATAAGATTAATGGTTATTCTTAATTCTAATATTTTCCTCTCTCCGTGG
GTTATTTTGAATTACATTCTAATTTTTCACACCTTAAAAAAAAGTGGAGATTAGCAGTGA
ACTTTGATTTTAGTATCTTCACCATTAGCCTCACATTACTTTAGATTCCTAACAAGATGG
AATCCCCTTCTGCTTTCCTAATGCTTTAAAATTGTATGATTTTCAgagttcccattgtgg
ctcagtggaaacaaatttgactagtatccatgaagactcaggttctatcccttgccttgc
tcagtgagttggggatccggtgtttccatgagctgtggtgtaggtcacagacacagctcg
gttcctgagttgctgtggctgtggtgtaggccagcagct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCAAATAAGGAAGCTTTTCATACAGCATGAAAGATAAAAAAAAAAAAGTTCTTCAAAG
AATGAGGATTTAGAAAATATCAACTATTATGTCTCTGATAATTAGTAAATCATGATATAA
TGAGATCAATATATAAGATTAATGGTTATTCTTAATTCTAATATTTTCCTCTCTCCGTGG
GTTATTTTGAATTACATTCTAATTTTTCACACCTTAAAAAAAAGTGGAGATTAGCAGTGA
ACTTTGATTTTAGTATCTTCACCATTAGCCTCACATTACTTTAGATTCCTAACAAGATGG
AATCCCCTTCTGCTTTCCTAATGCTTTAAAATTGTATGATTTTCAgagttcccattgtgg
ctcagtggaaacaaatttgactagtatccatgaagactcaggttctatcccttgccttgc
tcagtgagttggggatccggtgtttccatgagctgtggtgtaggtcacagacacagctcg
gttcctgagttgctgtggctgtggtgtaggccagcagct

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               51-342, gnl|bosTau2|chr4 (7822154-7821870)
               

               
               51-342, gnl|Hg17|chr7 (15904245-15903938)
               

               
               51-342, gnl|Mm7|chr12 (34527376-34527744)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-342, gnl|bosTau2|chr4 (7822154-7821870)
               

               
               51-342, gnl|Hg17|chr7 (15904245-15903938)
               

               
               51-342, gnl|Mm7|chr12 (34527376-34527744)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	51-342, gnl\|bosTau2\|chr4 (7822154-7821870)
	51-342, gnl\|Hg17\|chr7 (15904245-15903938)
	51-342, gnl\|Mm7\|chr12 (34527376-34527744)