Non-Coding RNA Search

rpigcb_14960.y1

Sequence:


               
               CCTGCTGGAGCAGGAGGTGCCCGGCTCCCGCGTGGGGCCCGAGCCCACTACCGACTGCTT
CGTGGCCGTCATGCATGGTGAGACCGAGGGCACGGTGCCTGGCAACGCCCTCGTCGTGGA
CCCGGACAAGCCCTTCCGAAAACTCAACCCCTTTGGGAACACCTTCCTCAACAGGTTCAT
GTGCGCCCAGCTCCCCAACCAGGTCCTGGAGAGCATCAGTATCATCGATACCCCAGGCAT
CCTGTCGGGGGCCAAACAGCGAGTGAGCCGAGGCTACGACTTCCCGGCCGTGCTGCGCTG
GTTCGCCGAGCGCGTGGACCTCATCATCCTGCTCTTCGATGCCCACAAGCTGGAGATCTC
GGACGAGTTCTCCGAGGCCATCGGCGCCCTGCGTGGCCACGAGGACAAGATCCGCGTGGT
GCTCAACAAGGCTGACATGGTGGAGACGCAGCAGCTGATGCGCGTCTACGGGGCGCTCAT
GTGGGCGCTGGGCAAGGTGGTGGGCACGCCTGAGGTGCTGCGCGTCTACATCGGTTCCTT
CTGGTCCCAACCACTCCTGGTGCCCGACAACCGGCGCCTCTTCGAGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGCTGGAGCAGGAGGTGCCCGGCTCCCGCGTGGGGCCCGAGCCCACTACCGACTGCTT
CGTGGCCGTCATGCATGGTGAGACCGAGGGCACGGTGCCTGGCAACGCCCTCGTCGTGGA
CCCGGACAAGCCCTTCCGAAAACTCAACCCCTTTGGGAACACCTTCCTCAACAGGTTCAT
GTGCGCCCAGCTCCCCAACCAGGTCCTGGAGAGCATCAGTATCATCGATACCCCAGGCAT
CCTGTCGGGGGCCAAACAGCGAGTGAGCCGAGGCTACGACTTCCCGGCCGTGCTGCGCTG
GTTCGCCGAGCGCGTGGACCTCATCATCCTGCTCTTCGATGCCCACAAGCTGGAGATCTC
GGACGAGTTCTCCGAGGCCATCGGCGCCCTGCGTGGCCACGAGGACAAGATCCGCGTGGT
GCTCAACAAGGCTGACATGGTGGAGACGCAGCAGCTGATGCGCGTCTACGGGGCGCTCAT
GTGGGCGCTGGGCAAGGTGGTGGGCACGCCTGAGGTGCTGCGCGTCTACATCGGTTCCTT
CTGGTCCCAACCACTCCTGGTGCCCGACAACCGGCGCCTCTTCGAGCTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5XHC3_XENLA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5XHC3_XENLA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               271-586, gnl|bosTau2|chr29 (34037565-34037250)
               

               
               271-586, gnl|Hg17|chr11 (64384386-64384071)
               

               
               271-586, gnl|Mm7|chr19 (6189018-6189333)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               271-586, gnl|bosTau2|chr29 (34037565-34037250)
               

               
               271-586, gnl|Hg17|chr11 (64384386-64384071)
               

               
               271-586, gnl|Mm7|chr19 (6189018-6189333)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	271-586, gnl\|bosTau2\|chr29 (34037565-34037250)
	271-586, gnl\|Hg17\|chr11 (64384386-64384071)
	271-586, gnl\|Mm7\|chr19 (6189018-6189333)