Non-Coding RNA Search

rpigcb_15395.y1

Sequence:


               
               AAAATATCTGAACcatgtggtaatactctgtttaacattttgaggaaccgccagactgtt
tttgcaaagtaattgcaccattttacaATGTCTCCATCCTCACCAGCGTTTGTTATTGTC
TTTTAGCTCAGCCATCATAGTAGAAGTGAAGTGGTATTtcagtgatattgagcatctttt
catgtgcttattgatcatttgtatgtctttggagaaatgtctgttcaggttcttggccca
atttttaattgagttgtatactttttattgttgagttttaagacttctttattattctgt
cagaagtctcttctcagatacacaatttgcaaatattttctctcattctgtgggttgtct
tttcactttcttaatggtctcccttgaggcacaaaggttttcaatttttatgaaatccac
cttaactatcttctctttttatcacttgtaattttggtgtcttatctaagaaaCTATGCA
GTCTTAATCTCAATCCAAGATAACGAATTTACTCCAGTGTTTTCTTCTGAAACGCTTAGC
CTTCTGGCTCAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATATCTGAACcatgtggtaatactctgtttaacattttgaggaaccgccagactgtt
tttgcaaagtaattgcaccattttacaATGTCTCCATCCTCACCAGCGTTTGTTATTGTC
TTTTAGCTCAGCCATCATAGTAGAAGTGAAGTGGTATTtcagtgatattgagcatctttt
catgtgcttattgatcatttgtatgtctttggagaaatgtctgttcaggttcttggccca
atttttaattgagttgtatactttttattgttgagttttaagacttctttattattctgt
cagaagtctcttctcagatacacaatttgcaaatattttctctcattctgtgggttgtct
tttcactttcttaatggtctcccttgaggcacaaaggttttcaatttttatgaaatccac
cttaactatcttctctttttatcacttgtaattttggtgtcttatctaagaaaCTATGCA
GTCTTAATCTCAATCCAAGATAACGAATTTACTCCAGTGTTTTCTTCTGAAACGCTTAGC
CTTCTGGCTCAGT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               83-551, gnl|bosTau2|chr8 (28336084-28336575)
               

               
               83-551, gnl|Hg17|chr9 (35534080-35534893)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               83-551, gnl|bosTau2|chr8 (28336084-28336575)
               

               
               83-551, gnl|Hg17|chr9 (35534080-35534893)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	83-551, gnl\|bosTau2\|chr8 (28336084-28336575)
	83-551, gnl\|Hg17\|chr9 (35534080-35534893)