Non-Coding RNA Search

rpigcb_15818.y1

Sequence:


               
               TTGGGAGTTCCCTGGTGGCCTACCAGGTTAAGGATCTGTGGCGCAGATTCAATCTCTGGC
CCGGGAACCTTTGCGTTGCCAAGGGCGCACAGCCAAAAAATTAATTAATTAATAATAAAA
TGGTCATTTTGATTGAAAGGCTGTCACTGCCACTTCCTCTTCCAGCTAAATAAATATATT
TTTAGTGTCTCCAGTTGTGGAAAGCCTTCAATACAACCATCGTGTATTTACTTTTGTCAG
ATTCTTTTACAAATGTTTACAATCTAAAAGTCTTGGGCAAAGAACTAGAAATGCACGCAG
TTGCAAAAACTGTTTATCACTTTATTTTCTAGCATCATTTTATTAACTTTACCTCTTCCT
TTCAAAATTGTGAATATCCAGTTTGCTTATGAACTCATGCTTGGCTTTTCTAAAATCTTT
CTTAAAAACTTGAGACCAGCATTATTCTCTTTTAAATGTTTTTTGCATAGAAATTTGAGC
ATATGAAATATTGTGAGAAATTGTTTTCAGTTTTGTTTAAATCACAGTGCCTCTCTGGAT
ATGTTCTTAAAATTATACAAGAAGAACTCTTTTTTGGGGGGAGTGGGGGGCGGTTAGGGC
CACCCTCACAGCATATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGGAGTTCCCTGGTGGCCTACCAGGTTAAGGATCTGTGGCGCAGATTCAATCTCTGGC
CCGGGAACCTTTGCGTTGCCAAGGGCGCACAGCCAAAAAATTAATTAATTAATAATAAAA
TGGTCATTTTGATTGAAAGGCTGTCACTGCCACTTCCTCTTCCAGCTAAATAAATATATT
TTTAGTGTCTCCAGTTGTGGAAAGCCTTCAATACAACCATCGTGTATTTACTTTTGTCAG
ATTCTTTTACAAATGTTTACAATCTAAAAGTCTTGGGCAAAGAACTAGAAATGCACGCAG
TTGCAAAAACTGTTTATCACTTTATTTTCTAGCATCATTTTATTAACTTTACCTCTTCCT
TTCAAAATTGTGAATATCCAGTTTGCTTATGAACTCATGCTTGGCTTTTCTAAAATCTTT
CTTAAAAACTTGAGACCAGCATTATTCTCTTTTAAATGTTTTTTGCATAGAAATTTGAGC
ATATGAAATATTGTGAGAAATTGTTTTCAGTTTTGTTTAAATCACAGTGCCTCTCTGGAT
ATGTTCTTAAAATTATACAAGAAGAACTCTTTTTTGGGGGGAGTGGGGGGCGGTTAGGGC
CACCCTCACAGCATATGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               106-575, gnl|bosTau2|chr25 (15331793-15331329)
               

               
               106-575, gnl|Hg17|chr16 (13952378-13952838)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               106-575, gnl|bosTau2|chr25 (15331793-15331329)
               

               
               106-575, gnl|Hg17|chr16 (13952378-13952838)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	106-575, gnl\|bosTau2\|chr25 (15331793-15331329)
	106-575, gnl\|Hg17\|chr16 (13952378-13952838)