Non-Coding RNA Search

rpigcb_16564.y1

Sequence:


               
               AAGATCTCCAACATGACTTTCAGCAACGGGAAACTAATAGTTAACCAAGACGGCTTTTAT
TACCTGTATGCCAACATCTGCTTTCGACATCACGAAACTTCAGGAAACCTCGATGCGAAG
TATCTTCAGCTGATGGTGTATGTCACCAAAACCAGCATCAAAATCCCAAGTTCTCACACT
CTGATGAAAGGAGGAAGCACCAAATACTGGTCAGGGAATTCTGAATTCCATTTTTACTCC
ATAAATGTTGGAGGATTTTTTAAGCTACGATCTGGCGAGGAAATCAGCATTGAGGTATCC
AACCCTTCACTTCTGGATCCAGACCAAGACGCCACGTACTTTGGGGCTTTTAAAGTTCGA
GATATAGACTGAGCCCCATTTTGTGGAGTTGTTTTCACGTATTTCCTAAGATGCATAGAC
AACTTTCTCTAAAACAAGCCAAGAAAGATGTATATAGGTGTGTGAGACTACTAAGCGGTA
TGGCCCCCAGGGTACCAGAAGACCCTCTCCATGCCTTTGAACTCTGTAGAGAGCAGATGT
ATTTACAGCCAATGGAAGGGTTTTCTTACACAGTGGTTTTTCAATTTTGTAATGAATTCC
AAGAATTAAAGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGATCTCCAACATGACTTTCAGCAACGGGAAACTAATAGTTAACCAAGACGGCTTTTAT
TACCTGTATGCCAACATCTGCTTTCGACATCACGAAACTTCAGGAAACCTCGATGCGAAG
TATCTTCAGCTGATGGTGTATGTCACCAAAACCAGCATCAAAATCCCAAGTTCTCACACT
CTGATGAAAGGAGGAAGCACCAAATACTGGTCAGGGAATTCTGAATTCCATTTTTACTCC
ATAAATGTTGGAGGATTTTTTAAGCTACGATCTGGCGAGGAAATCAGCATTGAGGTATCC
AACCCTTCACTTCTGGATCCAGACCAAGACGCCACGTACTTTGGGGCTTTTAAAGTTCGA
GATATAGACTGAGCCCCATTTTGTGGAGTTGTTTTCACGTATTTCCTAAGATGCATAGAC
AACTTTCTCTAAAACAAGCCAAGAAAGATGTATATAGGTGTGTGAGACTACTAAGCGGTA
TGGCCCCCAGGGTACCAGAAGACCCTCTCCATGCCTTTGAACTCTGTAGAGAGCAGATGT
ATTTACAGCCAATGGAAGGGTTTTCTTACACAGTGGTTTTTCAATTTTGTAATGAATTCC
AAGAATTAAAGCAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|16506817|gb|AAL23963.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|16506817|gb|AAL23963.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-558, gnl|bosTau2|chr12 (4151957-4152509)
               

               
               1-558, gnl|Hg17|chr13 (42078683-42079232)
               

               
               1-558, gnl|Mm7|chr14 (72959299-72958754)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-558, gnl|bosTau2|chr12 (4151957-4152509)
               

               
               1-558, gnl|Hg17|chr13 (42078683-42079232)
               

               
               1-558, gnl|Mm7|chr14 (72959299-72958754)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-558, gnl\|bosTau2\|chr12 (4151957-4152509)
	1-558, gnl\|Hg17\|chr13 (42078683-42079232)
	1-558, gnl\|Mm7\|chr14 (72959299-72958754)