Non-Coding RNA Search

rpigcb_16670.y1

Sequence:


               
               AAATACTCTGGGAATAGTCATACTGACAAACCAGTTACTCAGTTTTCCTCAGTTTAATTA
ATTGAATGTTATCTTTTAAGTGGACACTATTAAATGCTAAATAATAAGCTTATTTTTTAC
ACTACACTATTAAAATAATTTTGCCTTAGAATTTTTTTTAAGACAAGTTGAAGATTTTTT
TATGAGAAACCCCACCTATTTTTTGCAGCCTAAAATACCACTTAGGATTAGAGTTTGTTC
TTCATGCCAGCAGGATTTCACCAACAACTGTAAAGGCAGTGATCTTTGAATACCTTTAGG
TAATTTAGTCATTCATTGCTGGGAGAAGAGTAGCAAAAATAGGGTTTTAAACTGGTGCTT
TATTAAGTGACTCCTTTAAAGTGATGGTAGGTCATGAAGTAGGTACACTAATAATTTTCC
ATCAACTTAAAAGTGTCAAAACATCTTTGCAGAGTAACTGTAAGCTGTAAGTTAAGGGCT
AATATGTATTTCAGTGTCATTCCTCGCTTTTTCACTCTATAATTACAAACAAATTGAGAA
CACCATTAACTCGTCTGTATGTAAGTTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATACTCTGGGAATAGTCATACTGACAAACCAGTTACTCAGTTTTCCTCAGTTTAATTA
ATTGAATGTTATCTTTTAAGTGGACACTATTAAATGCTAAATAATAAGCTTATTTTTTAC
ACTACACTATTAAAATAATTTTGCCTTAGAATTTTTTTTAAGACAAGTTGAAGATTTTTT
TATGAGAAACCCCACCTATTTTTTGCAGCCTAAAATACCACTTAGGATTAGAGTTTGTTC
TTCATGCCAGCAGGATTTCACCAACAACTGTAAAGGCAGTGATCTTTGAATACCTTTAGG
TAATTTAGTCATTCATTGCTGGGAGAAGAGTAGCAAAAATAGGGTTTTAAACTGGTGCTT
TATTAAGTGACTCCTTTAAAGTGATGGTAGGTCATGAAGTAGGTACACTAATAATTTTCC
ATCAACTTAAAAGTGTCAAAACATCTTTGCAGAGTAACTGTAAGCTGTAAGTTAAGGGCT
AATATGTATTTCAGTGTCATTCCTCGCTTTTTCACTCTATAATTACAAACAAATTGAGAA
CACCATTAACTCGTCTGTATGTAAGTTTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-570, gnl|bosTau2|chr16 (53965542-53964956)
               

               
               1-570, gnl|Hg17|chr1 (193856928-193856352)
               

               
               1-570, gnl|Mm7|chr1 (139333685-139334246)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-570, gnl|bosTau2|chr16 (53965542-53964956)
               

               
               1-570, gnl|Hg17|chr1 (193856928-193856352)
               

               
               1-570, gnl|Mm7|chr1 (139333685-139334246)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-570, gnl\|bosTau2\|chr16 (53965542-53964956)
	1-570, gnl\|Hg17\|chr1 (193856928-193856352)
	1-570, gnl\|Mm7\|chr1 (139333685-139334246)