Non-Coding RNA Search

rpigcb_16796.y1

Sequence:


               
               CTTGAGATTAGGTTACTGAAGCTGAAGATGCGATGTTTTAATTGTGTTTAATTTTAATTA
AATTTAACTAGTCACCTGTAATTAGTGGCTACTTCATGGATAGCGCAGCTTTAAATGACA
GATCAGGTCATATTATTAATGTTTGGGGCAAATCTGTTTTGTGAACATTCCATCTAGAAG
CTTATACAAATGTGGAAACAAACTGACATTGGCAGTCCATTCTCTTAAATATTGCTGTGT
TTTTATATTATGGTTACTTGGGTGAAAATTTTAGAAATCAGTGGGATTTCACTTATCTCA
TTTGTGTGACAACCTCCAAAATAACAGAAGTCACTGCTTGACTCATTACATTGTACTTAA
AGCAGACCCAATAATTAGCAAGAGAAACACAGCGATGGTGTTTGGAAACACACATGCCGC
AAGCAAAAGGTTTCTGAGCTAAGGAAGCACTTGCCTCAAAACTTCACTGGCAGGTGGGGA
AAGAAGAAGCAAGCATTTAACAGCATTATAAAAATAGAGATTTTTTTTCATGTTGCTCCA
ATATCTAGAACAATAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGAGATTAGGTTACTGAAGCTGAAGATGCGATGTTTTAATTGTGTTTAATTTTAATTA
AATTTAACTAGTCACCTGTAATTAGTGGCTACTTCATGGATAGCGCAGCTTTAAATGACA
GATCAGGTCATATTATTAATGTTTGGGGCAAATCTGTTTTGTGAACATTCCATCTAGAAG
CTTATACAAATGTGGAAACAAACTGACATTGGCAGTCCATTCTCTTAAATATTGCTGTGT
TTTTATATTATGGTTACTTGGGTGAAAATTTTAGAAATCAGTGGGATTTCACTTATCTCA
TTTGTGTGACAACCTCCAAAATAACAGAAGTCACTGCTTGACTCATTACATTGTACTTAA
AGCAGACCCAATAATTAGCAAGAGAAACACAGCGATGGTGTTTGGAAACACACATGCCGC
AAGCAAAAGGTTTCTGAGCTAAGGAAGCACTTGCCTCAAAACTTCACTGGCAGGTGGGGA
AAGAAGAAGCAAGCATTTAACAGCATTATAAAAATAGAGATTTTTTTTCATGTTGCTCCA
ATATCTAGAACAATAATAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               161-559, gnl|bosTau2|chr10 (26206730-26207127)
               

               
               161-559, gnl|Hg17|chr14 (47155732-47155325)
               

               
               161-559, gnl|Mm7|chr12 (65107889-65107536)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-559, gnl|bosTau2|chr10 (26206730-26207127)
               

               
               161-559, gnl|Hg17|chr14 (47155732-47155325)
               

               
               161-559, gnl|Mm7|chr12 (65107889-65107536)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	161-559, gnl\|bosTau2\|chr10 (26206730-26207127)
	161-559, gnl\|Hg17\|chr14 (47155732-47155325)
	161-559, gnl\|Mm7\|chr12 (65107889-65107536)