Non-Coding RNA Search

rpigcb_16830.y1

Sequence:


               
               CAGCAGGATACCACCTCACCTGGAAATTCATCTTTAAGGTATAGTGTGTTCATCTTGGTG
TTGTCAGGTGCGGGATCAGCTTATACCTGGTGCTGGGAGTTGACACTCATTTCTTATACA
TGTGTCCTTGGTGGCCATTTGGACTCATTTTTCCCTCCCTTTGAACACCCCACTTTGCAC
TAGTCTGGGAACAGGGTTAGACCAATAGAGTTTTTCCGCTCTGATTTCTGCATGTTGGTT
ATGCATGCATTTCAAGTTAGTATGAAAAAACATAAATCAGTTTTTGATCTCACTGAGAAA
GTCTCTCTTGAGATTAAATAAAATACAGAACATACCTCATATTGATTAATGGACAACTTA
GTGCCAAGGAAACATTTATTATGGGTGCCAGAATCAAGGAGGCATCTTAGAAAGCTGAAG
GTCTTGAGAATTAATCTATAATTTGGGGTTTTTACTTGACTAAATAACATAGGACTTGGG
AAAGTAAATTGTAGAATTATCTTTTGTTTTGGTTTATACACCTAATCATTATCTAGCCCC
TCATTAAATGACATAAGTGATTGAGCCTTACACAAAATCAAGGTTTATATAAATGTTATT
TGATTAACTTGATATTTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCAGGATACCACCTCACCTGGAAATTCATCTTTAAGGTATAGTGTGTTCATCTTGGTG
TTGTCAGGTGCGGGATCAGCTTATACCTGGTGCTGGGAGTTGACACTCATTTCTTATACA
TGTGTCCTTGGTGGCCATTTGGACTCATTTTTCCCTCCCTTTGAACACCCCACTTTGCAC
TAGTCTGGGAACAGGGTTAGACCAATAGAGTTTTTCCGCTCTGATTTCTGCATGTTGGTT
ATGCATGCATTTCAAGTTAGTATGAAAAAACATAAATCAGTTTTTGATCTCACTGAGAAA
GTCTCTCTTGAGATTAAATAAAATACAGAACATACCTCATATTGATTAATGGACAACTTA
GTGCCAAGGAAACATTTATTATGGGTGCCAGAATCAAGGAGGCATCTTAGAAAGCTGAAG
GTCTTGAGAATTAATCTATAATTTGGGGTTTTTACTTGACTAAATAACATAGGACTTGGG
AAAGTAAATTGTAGAATTATCTTTTGTTTTGGTTTATACACCTAATCATTATCTAGCCCC
TCATTAAATGACATAAGTGATTGAGCCTTACACAAAATCAAGGTTTATATAAATGTTATT
TGATTAACTTGATATTTATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-620, gnl|bosTau2|chr8 (47018286-47018898)
               

               
               1-620, gnl|Hg17|chr9 (38710051-38709419)
               

               
               1-620, gnl|Mm7|chr13 (62328755-62328192)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-620, gnl|bosTau2|chr8 (47018286-47018898)
               

               
               1-620, gnl|Hg17|chr9 (38710051-38709419)
               

               
               1-620, gnl|Mm7|chr13 (62328755-62328192)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-620, gnl\|bosTau2\|chr8 (47018286-47018898)
	1-620, gnl\|Hg17\|chr9 (38710051-38709419)
	1-620, gnl\|Mm7\|chr13 (62328755-62328192)