Non-Coding RNA Search

rpigcb_16833.y1

Sequence:


               
               GGAGCGTGGCGGCTCTGGACCCGGCTTGTGTAGCAGACCTGCCCTGCAGAGCAGCGACTT
TGGAGAGTTCATTAGTGGAAGTCAGAGACCGGGGCCACTGCAGCCACCCCCAGACATTTC
TTAAAGGGGAGGGTTGTGTGCTTTTCCAGTGTCTTCTGGCAGCAGTTTGATTCCCTTGCT
TTTATTTCTATTTCCATAATTGGCAGCTTCAGAACTGGCTTTGGAAGACAGTTTGCTTTC
AACGTGACCACCAATTCCAAAATGCCCCGGTTATTTTAGGAACCCTACCCTCTTCCTCCG
GAGCTCTTTCGCAGGACTTCTCTTGGACGGGTCCAGGAGGAGAAGCGCTACAAAGCAGCC
ACTGTGCTTTCTGAACGGCCTCCCCCTGTATCGCTTAATTGAGAAGGTATACAAATGCTC
TCAGTCCAGCCAGACACCAAGCCGAAAGGTTGTGCTGGCTGCAACCGAAAGATCAAGGAC
CGGTATCTTCTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGCGTGGCGGCTCTGGACCCGGCTTGTGTAGCAGACCTGCCCTGCAGAGCAGCGACTT
TGGAGAGTTCATTAGTGGAAGTCAGAGACCGGGGCCACTGCAGCCACCCCCAGACATTTC
TTAAAGGGGAGGGTTGTGTGCTTTTCCAGTGTCTTCTGGCAGCAGTTTGATTCCCTTGCT
TTTATTTCTATTTCCATAATTGGCAGCTTCAGAACTGGCTTTGGAAGACAGTTTGCTTTC
AACGTGACCACCAATTCCAAAATGCCCCGGTTATTTTAGGAACCCTACCCTCTTCCTCCG
GAGCTCTTTCGCAGGACTTCTCTTGGACGGGTCCAGGAGGAGAAGCGCTACAAAGCAGCC
ACTGTGCTTTCTGAACGGCCTCCCCCTGTATCGCTTAATTGAGAAGGTATACAAATGCTC
TCAGTCCAGCCAGACACCAAGCCGAAAGGTTGTGCTGGCTGCAACCGAAAGATCAAGGAC
CGGTATCTTCTAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-340, gnl|bosTau2|chr5 (54586980-54586637)
               

               
               1-340, gnl|Hg17|chr12 (16651362-16651017)
               

               
               1-340, gnl|Mm7|chr6 (138468362-138468026)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-340, gnl|bosTau2|chr5 (54586980-54586637)
               

               
               1-340, gnl|Hg17|chr12 (16651362-16651017)
               

               
               1-340, gnl|Mm7|chr6 (138468362-138468026)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-340, gnl\|bosTau2\|chr5 (54586980-54586637)
	1-340, gnl\|Hg17\|chr12 (16651362-16651017)
	1-340, gnl\|Mm7\|chr6 (138468362-138468026)