Non-Coding RNA Search

rpigcb_17669.y1

Sequence:


               
               ACTGGAGAAAAACCTTACAAGTGCAACGAATGCGGGAAATTCTTTAGCCACTTTGATGGA
CTCATTCAACATCAGATAGTTCACACTGGTGAGCGGCCCTTTGGGTGCAGCATATGTGGG
AAAGCCTTCAGCCGAAGCTCTGATCTCATGAAACATCAGCGAGTCCACACTGGTGAACGG
CCTTATGAATGCAGAGAATGTGGGAAATTGTTTAGCCAAAGCTCCAGCCTCAATAGCCAT
CGGAGACTTCACACTGGTGAGCGGCCTTATCAGTGCCCTGAATGTGGGAAATTCTTTAGC
CAACGCTCCAGCTTCAATAACCATCGGAGACTTCACACTGGTGAGCGGCCTTATGAGTGC
CTTGAATGTGGGAAAACCTTCAGACAAAGTTCTAATTTGAGGCAGCACCAGAAAGTTCAC
AAACCAGAGAAGCCATATAAGTGCCATGAATGTGGAAAAGCTTTCAGCCAGAGGTCTACC
CTCATCCGGCATCAGAAAATTCATGCTAGAGAAAGGACTTCGGGGAATGTGCTCCCTCCT
TCTTCAACACAAAGGCACACACTAGAGATTGGCTCTGAGAGTGGTCTTTATTAGGGAGCT
TTCAGGCAGAAGTTGAACTTTGTTTATCCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGAGAAAAACCTTACAAGTGCAACGAATGCGGGAAATTCTTTAGCCACTTTGATGGA
CTCATTCAACATCAGATAGTTCACACTGGTGAGCGGCCCTTTGGGTGCAGCATATGTGGG
AAAGCCTTCAGCCGAAGCTCTGATCTCATGAAACATCAGCGAGTCCACACTGGTGAACGG
CCTTATGAATGCAGAGAATGTGGGAAATTGTTTAGCCAAAGCTCCAGCCTCAATAGCCAT
CGGAGACTTCACACTGGTGAGCGGCCTTATCAGTGCCCTGAATGTGGGAAATTCTTTAGC
CAACGCTCCAGCTTCAATAACCATCGGAGACTTCACACTGGTGAGCGGCCTTATGAGTGC
CTTGAATGTGGGAAAACCTTCAGACAAAGTTCTAATTTGAGGCAGCACCAGAAAGTTCAC
AAACCAGAGAAGCCATATAAGTGCCATGAATGTGGAAAAGCTTTCAGCCAGAGGTCTACC
CTCATCCGGCATCAGAAAATTCATGCTAGAGAAAGGACTTCGGGGAATGTGCTCCCTCCT
TCTTCAACACAAAGGCACACACTAGAGATTGGCTCTGAGAGTGGTCTTTATTAGGGAGCT
TTCAGGCAGAAGTTGAACTTTGTTTATCCAGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21755101|dbj|BAC04624.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21755101|dbj|BAC04624.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-514, gnl|bosTau2|chr10 (8996600-8996087)
               

               
               1-514, gnl|Hg17|chr19 (42818405-42817808)
               

               
               1-514, gnl|Mm7|chr2 (127310031-127309602)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-514, gnl|bosTau2|chr10 (8996600-8996087)
               

               
               1-514, gnl|Hg17|chr19 (42818405-42817808)
               

               
               1-514, gnl|Mm7|chr2 (127310031-127309602)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-514, gnl\|bosTau2\|chr10 (8996600-8996087)
	1-514, gnl\|Hg17\|chr19 (42818405-42817808)
	1-514, gnl\|Mm7\|chr2 (127310031-127309602)