Non-Coding RNA Search

rpigcb_17962.y1

Sequence:


               
               CGAAGTGAATGAAGGGGAACTGAAGGAAATTAAACAAGACATCTCAAGTCTCCGCTATGA
ACTCCTTGAAGAAAAATCTCAGAATTCAGAGGACCTGGCAGAACTTATTAGAAAACTTGG
GGAGAAATTATCAATGAGGCCAAATCAAGAGGAAAGCAATAGATAATGCAAAGACTTTCT
TAAAAATTCATATTTATTTGTCCACTTGAAGCCATATTATTTTCTGATTTATTTTTTTAA
GTGCCAGTGTAACCACCTTTTAAACAAGAGAAAGTTCAAAGATAACTTGGGTCATCCTAT
CCTTTGGGACTACTATTTAATATTTTTGGTGATTAAATTTCATCATTCAGGCTAAAGATT
GCAGTTTATGATGAAAAGTATGCACAGTTGTTTGGTGCTTGTTTTGTAAACTGCTTTTTT
GGGTATGACTATTGTGATGATGTGTCGCCATGTAATGTCTGCCTGGGAATCGTTTCAGCT
GGCTGGGGTAGACACACAGACAGTGGTACTTCCTGTGATGGTGATTTCAGGCATTTCAGG
CATTTTCTGCTTTGTGGATCCCTTGATGGTGACGTCTAGACTTGAATTCTAGAGAAAAAT
AATTTCTTGCCATTTAGAGAACACTGTTTAATCATCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAAGTGAATGAAGGGGAACTGAAGGAAATTAAACAAGACATCTCAAGTCTCCGCTATGA
ACTCCTTGAAGAAAAATCTCAGAATTCAGAGGACCTGGCAGAACTTATTAGAAAACTTGG
GGAGAAATTATCAATGAGGCCAAATCAAGAGGAAAGCAATAGATAATGCAAAGACTTTCT
TAAAAATTCATATTTATTTGTCCACTTGAAGCCATATTATTTTCTGATTTATTTTTTTAA
GTGCCAGTGTAACCACCTTTTAAACAAGAGAAAGTTCAAAGATAACTTGGGTCATCCTAT
CCTTTGGGACTACTATTTAATATTTTTGGTGATTAAATTTCATCATTCAGGCTAAAGATT
GCAGTTTATGATGAAAAGTATGCACAGTTGTTTGGTGCTTGTTTTGTAAACTGCTTTTTT
GGGTATGACTATTGTGATGATGTGTCGCCATGTAATGTCTGCCTGGGAATCGTTTCAGCT
GGCTGGGGTAGACACACAGACAGTGGTACTTCCTGTGATGGTGATTTCAGGCATTTCAGG
CATTTTCTGCTTTGTGGATCCCTTGATGGTGACGTCTAGACTTGAATTCTAGAGAAAAAT
AATTTCTTGCCATTTAGAGAACACTGTTTAATCATCTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-636, gnl|bosTau2|chr11 (86915043-86915664)
               

               
               12-636, gnl|Hg17|chr11 (100829050-100828395)
               

               
               12-636, gnl|Mm7|chr9 (8705981-8706686)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-636, gnl|bosTau2|chr11 (86915043-86915664)
               

               
               12-636, gnl|Hg17|chr11 (100829050-100828395)
               

               
               12-636, gnl|Mm7|chr9 (8705981-8706686)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	12-636, gnl\|bosTau2\|chr11 (86915043-86915664)
	12-636, gnl\|Hg17\|chr11 (100829050-100828395)
	12-636, gnl\|Mm7\|chr9 (8705981-8706686)