rpigcb_18048.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGTGCTCCGAGCGCTGAGAGCCGGGCCGGGCAGGCGGGCGCGCGCGGGCTGGGCAGAC GGGACGCGCGCCGTAAGCGGGCCGCTGGAGGGGTCTAGTTGGGCGGTGTCGAGAGCCGGA CCCACGAGCTGAGGAGTGGGCACCGCGATGGCCGAGGGGAGCGCCGTGTCCGACCCTCAG CACGCCGCGCGCCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGGAGTCCCGCTTCTGCGAC GCGCACCTGGTCCTCGACGGGGAAGAGATTCCGGTGCAGAAGAACATCCTGGCAGCTGCC AGCCCGTACATCAGGACAAAGTTAAACTATAACCCTCCAAAAGATGATGGATCAACCTAT AAGATTGAACTTGAAGGGATATCGGTAATGGTTATGAGAGAGATCCTGGATTACATCTTC AGTGGGCAGATCCGGCTGAACGAGGAAACCATCCAGGACGTTGTGCAGGCCGCAGACCTG CTCCTGCTGACGGATCTTAAAACTCTGTGCTGCGAGTTTTTGGAAGGCTGCATTGCTGCC GAGAACTGCATCGGTATCCGAGACTTTGCACTTCATTACTGCCTGCACCACGTCCATTAC CTGGCCACGGAATACCTGGAGACGCACTTCCGAGATGTCAGCAGCACAGAAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGTGCTCCGAGCGCTGAGAGCCGGGCCGGGCAGGCGGGCGCGCGCGGGCTGGGCAGAC GGGACGCGCGCCGTAAGCGGGCCGCTGGAGGGGTCTAGTTGGGCGGTGTCGAGAGCCGGA CCCACGAGCTGAGGAGTGGGCACCGCGATGGCCGAGGGGAGCGCCGTGTCCGACCCTCAG CACGCCGCGCGCCTGCTGCGAGCGCTCAGCTCTTTCCGCGAGGAGTCCCGCTTCTGCGAC GCGCACCTGGTCCTCGACGGGGAAGAGATTCCGGTGCAGAAGAACATCCTGGCAGCTGCC AGCCCGTACATCAGGACAAAGTTAAACTATAACCCTCCAAAAGATGATGGATCAACCTAT AAGATTGAACTTGAAGGGATATCGGTAATGGTTATGAGAGAGATCCTGGATTACATCTTC AGTGGGCAGATCCGGCTGAACGAGGAAACCATCCAGGACGTTGTGCAGGCCGCAGACCTG CTCCTGCTGACGGATCTTAAAACTCTGTGCTGCGAGTTTTTGGAAGGCTGCATTGCTGCC GAGAACTGCATCGGTATCCGAGACTTTGCACTTCATTACTGCCTGCACCACGTCCATTAC CTGGCCACGGAATACCTGGAGACGCACTTCCGAGATGTCAGCAGCACAGAAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 14-315, gnl|bosTau2|chr18 (7430579-7430276) | |
| 14-315, gnl|Hg17|chr16 (79906105-79906387) | |
| 14-315, gnl|Mm7|chr8 (115771523-115771800) | |
| 427-653, gnl|bosTau2|chr18 (7402241-7402015) | |
| 427-653, gnl|canFam2|chr5 (73556011-73555671) | |
| 427-653, gnl|danRer3|chr18 (12665339-12665679) | |
| 427-653, gnl|dasNov1|scaffold_1442 (68877-69217) | |
| 427-653, gnl|echTel1|scaffold_281617 (3808-4148) | |
| 427-653, gnl|fr1|chrUn (271685209-271684878) | |
| 427-653, gnl|galGal2|chrUn (130153103-130153442) | |
| 427-653, gnl|hg17|chr16 (79945501-79945841) | |
| 427-653, gnl|Hg17|chr16 (79945508-79945734) | |
| 427-653, gnl|loxAfr1|scaffold_8186 (57128-57444) | |
| 427-653, gnl|mm7|chr8 (115800635-115800975) | |
| 427-653, gnl|Mm7|chr8 (115800642-115800868) | |
| 427-653, gnl|monDom2|scaffold_1 (134190910-134190570) | |
| 427-653, gnl|oryCun1|scaffold_214249 (10976-10636) | |
| 427-653, gnl|panTro1|chr18 (74815321-74815661) | |
| 427-653, gnl|rheMac2|chr20 (79493572-79493912) | |
| 427-653, gnl|rn3|chr19 (47297480-47297818) | |
| 427-653, gnl|tetNig1|chrUn_random (105754005-105754336) | |
| 427-653, gnl|xenTro1|scaffold_1113 (188302-187965) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-315, gnl|bosTau2|chr18 (7430579-7430276) | |
| 14-315, gnl|Hg17|chr16 (79906105-79906387) | |
| 14-315, gnl|Mm7|chr8 (115771523-115771800) | |
| 427-653, gnl|bosTau2|chr18 (7402241-7402015) | |
| 427-653, gnl|canFam2|chr5 (73556011-73555671) | |
| 427-653, gnl|danRer3|chr18 (12665339-12665679) | |
| 427-653, gnl|dasNov1|scaffold_1442 (68877-69217) | |
| 427-653, gnl|echTel1|scaffold_281617 (3808-4148) | |
| 427-653, gnl|fr1|chrUn (271685209-271684878) | |
| 427-653, gnl|galGal2|chrUn (130153103-130153442) | |
| 427-653, gnl|hg17|chr16 (79945501-79945841) | |
| 427-653, gnl|Hg17|chr16 (79945508-79945734) | |
| 427-653, gnl|loxAfr1|scaffold_8186 (57128-57444) | |
| 427-653, gnl|mm7|chr8 (115800635-115800975) | |
| 427-653, gnl|Mm7|chr8 (115800642-115800868) | |
| 427-653, gnl|monDom2|scaffold_1 (134190910-134190570) | |
| 427-653, gnl|oryCun1|scaffold_214249 (10976-10636) | |
| 427-653, gnl|panTro1|chr18 (74815321-74815661) | |
| 427-653, gnl|rheMac2|chr20 (79493572-79493912) | |
| 427-653, gnl|rn3|chr19 (47297480-47297818) | |
| 427-653, gnl|tetNig1|chrUn_random (105754005-105754336) | |
| 427-653, gnl|xenTro1|scaffold_1113 (188302-187965) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |