Non-Coding RNA Search

rpigcb_2358.y1

Sequence:


               
               GGAATTCGCACGAGGGAGATCCTCTTCGCCAAGGTCAGCCAGCCCTTTCACAACGACTCT
CAGCCGCGATGCACCTTCTCCCAAGAGAACCAAGCGGAGACCAATGCCTGGTTCACCTCC
CGCTTTCTCTACCACATCGGAGGATTCCTGCTGCCAATGCTGGTGATGAGCTGGTGTTAC
GTAGGGGTGGTGCACAGGCTGTGCCAGGCCCAGCGGCGCCCTCAGCGGCAGAAGGCGGTC
AGAGTGGCCATCCTGGTGACCAGCGTCTTCTTTCTCTGCTGGTCACCCTACCACATTGTT
ATCTTCCTGGACACTCTGGCGAGGCTGAAAGCCTTGGGCAATAGCTGCGAGCTGAATGGC
TATCTCTCCGTGGCCATCACCATAAGCGAGTTCCTGGGCCTGGCCCACTGCTGCCTCAAT
CCCATGCTCTACACATTCGCTGGCGTGAAGTTCCGCAGCGACCTGTCACGGCTTCTGACC
AAGCTGGGCTGCGCCGGCCCTGCCTCCCTTTGCCAGATCTTCCCTAGTTGGCGCAAGAGC
AGTCTCTCGGAGTCAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAATTCGCACGAGGGAGATCCTCTTCGCCAAGGTCAGCCAGCCCTTTCACAACGACTCT
CAGCCGCGATGCACCTTCTCCCAAGAGAACCAAGCGGAGACCAATGCCTGGTTCACCTCC
CGCTTTCTCTACCACATCGGAGGATTCCTGCTGCCAATGCTGGTGATGAGCTGGTGTTAC
GTAGGGGTGGTGCACAGGCTGTGCCAGGCCCAGCGGCGCCCTCAGCGGCAGAAGGCGGTC
AGAGTGGCCATCCTGGTGACCAGCGTCTTCTTTCTCTGCTGGTCACCCTACCACATTGTT
ATCTTCCTGGACACTCTGGCGAGGCTGAAAGCCTTGGGCAATAGCTGCGAGCTGAATGGC
TATCTCTCCGTGGCCATCACCATAAGCGAGTTCCTGGGCCTGGCCCACTGCTGCCTCAAT
CCCATGCTCTACACATTCGCTGGCGTGAAGTTCCGCAGCGACCTGTCACGGCTTCTGACC
AAGCTGGGCTGCGCCGGCCCTGCCTCCCTTTGCCAGATCTTCCCTAGTTGGCGCAAGAGC
AGTCTCTCGGAGTCAGAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|438799|gb|AAA16852.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|438799|gb|AAA16852.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               15-558, gnl|bosTau2|chr15 (16874620-16874077)
               

               
               15-558, gnl|Hg17|chr11 (118270012-118270555)
               

               
               15-558, gnl|Mm7|chr9 (44448149-44447606)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-558, gnl|bosTau2|chr15 (16874620-16874077)
               

               
               15-558, gnl|Hg17|chr11 (118270012-118270555)
               

               
               15-558, gnl|Mm7|chr9 (44448149-44447606)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	15-558, gnl\|bosTau2\|chr15 (16874620-16874077)
	15-558, gnl\|Hg17\|chr11 (118270012-118270555)
	15-558, gnl\|Mm7\|chr9 (44448149-44447606)