Non-Coding RNA Search

rpigcb_3703.y1

Sequence:


               
               ATTTCTCCTTTAAAAAACAGTAACTTGCATCTTCTGATATAAGCTAACCTCCACCTGGAG
AAGACATTAGTGTTATATGTGGAGGCACAGGGAGGCTTACTGCATGGATGAAAGTAACCT
TTACTTTTCCAGTGGTCTCTGGCTGGTGTCCCCCAAAAGTGCAAAGGGTAAGAAAACACA
AAATGGTTAAGCATCCAGGGCTAGGATTGCAGCTTTTAGATCCAAACTGAGCTCAGAGGT
GGTCAGAGTGCATGTTATAAGATGGAATTTGGTATTTACAGAAGCCAGAGCCTTAGTCTT
CCTATGAAAGAATAACCAGATAACCTTGAAATGTTTTTCCTTCATATTAGTTGGTTAATT
GGATGTAAATGAATAACCTTTATTGAATAAAAATACTGATACATGAAAACTGACCCAAGA
AGAAGCAGCCCCCTTTCTTGCCCAAATTTATGTCATTTTCTTTTATATCATTAGGCAACA
TTCTAAGACTATATGGCTTGTTTTCAATTTGTTGCATTTTAAAATTCCTCCCTCATTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTCTCCTTTAAAAAACAGTAACTTGCATCTTCTGATATAAGCTAACCTCCACCTGGAG
AAGACATTAGTGTTATATGTGGAGGCACAGGGAGGCTTACTGCATGGATGAAAGTAACCT
TTACTTTTCCAGTGGTCTCTGGCTGGTGTCCCCCAAAAGTGCAAAGGGTAAGAAAACACA
AAATGGTTAAGCATCCAGGGCTAGGATTGCAGCTTTTAGATCCAAACTGAGCTCAGAGGT
GGTCAGAGTGCATGTTATAAGATGGAATTTGGTATTTACAGAAGCCAGAGCCTTAGTCTT
CCTATGAAAGAATAACCAGATAACCTTGAAATGTTTTTCCTTCATATTAGTTGGTTAATT
GGATGTAAATGAATAACCTTTATTGAATAAAAATACTGATACATGAAAACTGACCCAAGA
AGAAGCAGCCCCCTTTCTTGCCCAAATTTATGTCATTTTCTTTTATATCATTAGGCAACA
TTCTAAGACTATATGGCTTGTTTTCAATTTGTTGCATTTTAAAATTCCTCCCTCATTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-537, gnl|bosTau2|chr17 (37058239-37057687)
               

               
               2-537, gnl|Hg17|chr12 (111155703-111155162)
               

               
               2-537, gnl|Mm7|chr5 (120534549-120535279)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-537, gnl|bosTau2|chr17 (37058239-37057687)
               

               
               2-537, gnl|Hg17|chr12 (111155703-111155162)
               

               
               2-537, gnl|Mm7|chr5 (120534549-120535279)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	2-537, gnl\|bosTau2\|chr17 (37058239-37057687)
	2-537, gnl\|Hg17\|chr12 (111155703-111155162)
	2-537, gnl\|Mm7\|chr5 (120534549-120535279)