Non-Coding RNA Search

rpigcb_3850.y1

Sequence:


               
               CACAACATAACTActcggatcccacgatgctgtggctctggtgtaggccagtggctacag
ctctgattagacccctaggctgggaacttccatatgccatgggaagtggccctagaaaag
gcAAAAAAAAAAAGTGCAGAGTCCAAACATACAGAGAAAAATGGATGGGAGCTTGTGTGC
CTCATACTAAGGCATCCCAAGGGAGAGGTGTCTGGCACGGGCCCATCCTTGTCTTTTGGT
CTCCTTGGCATGTACATCTTTTAGTGGTGCCGGCTTGAGGATAACACCCATTAAAGTAAT
TCCATTACTTTGCTCCATTATTTTAGAGCAGCCCTCAGGTTATTACTCTCATTTCTCAAG
CTGACTCCTTTGTGGAATATTCTTACTTATTTGGCCATTATATTTCTCCCTGAAACTGAG
TACAGTCTGATTAGCCATTTAGTCAGAAGCCATGAAACGTGTTTAGGGTGAAACAGTCCT
GCAATGCTCTAAAAACTCTCTGGATTAACTGATGAAAAATCTTTTAAAAACATGCAAGAA
ATAGAGGACCTTGTCCCAGACCTATGGGCTGCCAGGTGCCGTGAGTTGGATGTCCTGCGT
GGGTGCCCTGCCAACTCTACCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAACATAACTActcggatcccacgatgctgtggctctggtgtaggccagtggctacag
ctctgattagacccctaggctgggaacttccatatgccatgggaagtggccctagaaaag
gcAAAAAAAAAAAGTGCAGAGTCCAAACATACAGAGAAAAATGGATGGGAGCTTGTGTGC
CTCATACTAAGGCATCCCAAGGGAGAGGTGTCTGGCACGGGCCCATCCTTGTCTTTTGGT
CTCCTTGGCATGTACATCTTTTAGTGGTGCCGGCTTGAGGATAACACCCATTAAAGTAAT
TCCATTACTTTGCTCCATTATTTTAGAGCAGCCCTCAGGTTATTACTCTCATTTCTCAAG
CTGACTCCTTTGTGGAATATTCTTACTTATTTGGCCATTATATTTCTCCCTGAAACTGAG
TACAGTCTGATTAGCCATTTAGTCAGAAGCCATGAAACGTGTTTAGGGTGAAACAGTCCT
GCAATGCTCTAAAAACTCTCTGGATTAACTGATGAAAAATCTTTTAAAAACATGCAAGAA
ATAGAGGACCTTGTCCCAGACCTATGGGCTGCCAGGTGCCGTGAGTTGGATGTCCTGCGT
GGGTGCCCTGCCAACTCTACCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               138-619, gnl|bosTau2|chr5 (26852566-26853046)
               

               
               138-619, gnl|Hg17|chr12 (41253465-41252992)
               

               
               138-619, gnl|Mm7|chr15 (93659820-93659307)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               138-619, gnl|bosTau2|chr5 (26852566-26853046)
               

               
               138-619, gnl|Hg17|chr12 (41253465-41252992)
               

               
               138-619, gnl|Mm7|chr15 (93659820-93659307)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	138-619, gnl\|bosTau2\|chr5 (26852566-26853046)
	138-619, gnl\|Hg17\|chr12 (41253465-41252992)
	138-619, gnl\|Mm7\|chr15 (93659820-93659307)