Non-Coding RNA Search

rpigcb_3927.y1

Sequence:


               
               TCTACAAGAGTTACAGTGGTATTGAGTACCACCTGTACCACTATGACCACGACAACCCAC
CACCCCCACAGCAGACTCCACTCCGAAAGCACAAGAAGAAGGGGCGCCAGTCACGCCCAG
CCAACAAGCAGTCACCCAGCCCCTCAGAGGTATCCCAGTCACCCAGCCGTGAGGTGATGA
GTTATGCACAGGCCCAGCGCATGGTAGAGGTGGACCTGCATGGCCGAGTCCATCGCATCA
GCATCTTTGACAACCTGGATGTGGTGTCAGAGGATGAGGAGGCGCCTGAGGAGGCCCCTG
AAAATGGCAGCAATAAGGAGAACACTGAGACACCGGCTGCTACTCCCAAGTCAGGCAAGC
ATAAGAACAAGGAGAAGCGCAAGGACTCCAACCATCACCACCACCACAATGCTTCTGCGA
GCACCACTCCCAAGCTGCCAGAGGTGGTGTACCGGGAGTTGGAGCAGGATACCCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTACAAGAGTTACAGTGGTATTGAGTACCACCTGTACCACTATGACCACGACAACCCAC
CACCCCCACAGCAGACTCCACTCCGAAAGCACAAGAAGAAGGGGCGCCAGTCACGCCCAG
CCAACAAGCAGTCACCCAGCCCCTCAGAGGTATCCCAGTCACCCAGCCGTGAGGTGATGA
GTTATGCACAGGCCCAGCGCATGGTAGAGGTGGACCTGCATGGCCGAGTCCATCGCATCA
GCATCTTTGACAACCTGGATGTGGTGTCAGAGGATGAGGAGGCGCCTGAGGAGGCCCCTG
AAAATGGCAGCAATAAGGAGAACACTGAGACACCGGCTGCTACTCCCAAGTCAGGCAAGC
ATAAGAACAAGGAGAAGCGCAAGGACTCCAACCATCACCACCACCACAATGCTTCTGCGA
GCACCACTCCCAAGCTGCCAGAGGTGGTGTACCGGGAGTTGGAGCAGGATACCCCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-477, gnl|bosTau2|chr22 (11885834-11886310)
               

               
               1-477, gnl|Hg17|chr3 (9750916-9751392)
               

               
               1-477, gnl|Mm7|chr6 (113470832-113471305)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-477, gnl|bosTau2|chr22 (11885834-11886310)
               

               
               1-477, gnl|Hg17|chr3 (9750916-9751392)
               

               
               1-477, gnl|Mm7|chr6 (113470832-113471305)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-477, gnl\|bosTau2\|chr22 (11885834-11886310)
	1-477, gnl\|Hg17\|chr3 (9750916-9751392)
	1-477, gnl\|Mm7\|chr6 (113470832-113471305)